Pseudodesulfovibrio nedwellii: SYK_10960
Help
Entry
SYK_10960 CDS
T09024
Name
(GenBank) hypothetical protein
Organism
pnw
Pseudodesulfovibrio nedwellii
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Response_reg
HATPase_c
HisKA
PAS
PAS_4
PAS_9
PAS_8
PAS_3
Hpt
PAS_7
HATPase_c_3
HATPase_c_2
PBP_dimer
HAMP
Motif
Other DBs
NCBI-ProteinID:
BDQ36736
LinkDB
All DBs
Position
complement(1148152..1151337)
Genome browser
AA seq
1061 aa
AA seq
DB search
MEEESVVSLCDAFSKIDIVVFINVVDHRGNEVYSFGEIEEGVTIVKGKSVSYEDVEVGYI
QLGLTPLIFEDKVYETTWISLLSLLFVAIVLGVFTKLILNKNLRTPLDLLIARIESISAG
EYAEHEEEGNLLEMRTILSKFNEMAGKVRSREDLLRLSEEKYRRLFETTTEGIIVIDKDR
RLIMVNKVLADMLGYIEMEMYGMPIADLLHPDDLEHHDQEMEKRVQGLSSQYERRLMHKD
GHIVWTIVSSSPMIGMKGAFDGSFGMITDISDLRRAQAELKIAYDEMEQRVILRTDELNK
TNRLLTSEIHIRKQTEKAIIDAKEAAEDATRAKSEFLANMSHEIRTPMNAIIGMTHLTKM
TNLSATQKDYLNKIDISAKSLLGIINDVLDMSKIEAGMLSVESVGFTIDQVLEQLTTIVS
PRANEKKLEFLINVDKKVPNSVVGDSMRLAQILINLCNNAVKFTDEGAVVVSIVPLELKQ
EQAKLRFTVKDDGIGIKLDQIDELFQPFTQADASTTRKYGGTGLGLNLCNQLVSLMGGEI
GVESEPGKGSLFWFEIPFPIYHRDKEPALLPGELQGQRALVVDDNDTSQIILKGMLEHMG
LRVALAGSGEEALEILRNVPKEEAFNLLVIDWRMPGRNGIQTAGAILSDESISPKPPMFM
VSAYGNASLVKKSNEMGFKGLLFKPVNQSFLFNLVVETLGKGMVTTSDSVVREGVTDNLG
GARVLLVEDNEINRQVALEILASAKIKVFEAVNGQAALDFLAKTPVDLVLMDVQMPIMDG
YEATRRLREQDRFNDLPIIAMTAHAMVEDIERSQSVGMNGHVAKPFDPEDLFKVLAQWIE
PTSVHQSRPLPLTEEPVLGDSLPASMDGIDVQLGLRRARGNKELYKNLLLLLDEKYSDAA
QEIEQARAEGRLEEAVGLAHSVKGTSGMLGAMELFESSSDLEHALDESSDDVQEKLERFS
YDMSVVMQSIAVIKEIEGTKTVLKQVGEVADAADLLASLEALKVPLSEGAPVVCRKKAKD
VQVLVWPGELHDDVVRMLKLIAEYDFKKALVLVKDLEKRMV
NT seq
3186 nt
NT seq
+upstream
nt +downstream
nt
atggaagaagagtctgttgtcagtttgtgtgacgccttttccaaaatagatattgtcgtt
ttcatcaacgttgtcgaccaccgtgggaacgaggtttattcctttggagagattgaggaa
ggggtgactatcgtcaaggggaaaagcgtaagctacgaggatgtcgaagttggatatatt
cagcttggcctgacgccgcttatttttgaagataaggtatatgaaaccacttggatcagc
cttttgtccctgttatttgttgccattgttctcggtgtttttactaaattgattcttaac
aaaaatttacgaacaccattggatttgcttattgcccgaatcgaaagcatatctgctggt
gaatatgcggaacacgaggaagaaggaaatcttctggaaatgcgaacaattctttccaag
ttcaatgaaatggctggaaaggttcggtcgcgcgaagacctgttgcgattgagtgaagag
aagtacaggcgtcttttcgagacaacgactgaaggtataatcgttatcgataaggacaga
cgtttgatcatggtcaataaggtcttggccgacatgcttggttatatcgagatggaaatg
tacggtatgccgatagcagatttgttgcatcctgatgatctggaacaccatgaccaagag
atggaaaagcgggttcaaggtctttcctcgcagtatgagcgccggcttatgcacaaagac
gggcatatcgtttggacaattgtttcatcaagccccatgattgggatgaagggagccttt
gacggatcgtttgggatgattacggatatctctgatttacggagagctcaggctgaactc
aaaattgcgtatgatgaaatggagcaacgtgtcattctgcggactgatgagttgaataag
acgaataggcttctgacgtctgaaatccatattcgtaaacagactgaaaaagcgattatc
gacgccaaggaagcggctgaggatgcaactagagccaagagtgaatttcttgccaacatg
agtcatgaaattcgtactcccatgaatgcgattataggtatgacgcatctgacgaagatg
accaatctgtcggccacccagaaggactacctcaacaagatagatatttcggccaagtct
ttgcttgggattattaatgatgtgttggatatgtccaaaattgaagcgggcatgctcagt
gtggagtcggtcggttttacgatcgatcaggtgttggagcagttgacaaccattgtttct
ccaagagccaacgaaaagaaactcgagtttctcattaacgtggacaagaaagttccaaat
tctgtcgttggtgactccatgcgtttggcacagattcttatcaatctgtgtaacaacgcc
gtcaaatttacggacgaaggggctgtggtcgtttctattgttccgttggagttgaaacag
gaacaggcaaaattgcgttttaccgtcaaggatgatggcatagggattaagttagatcag
attgatgaactttttcaaccattcacgcaggcagacgcttcgaccacccgcaaatatggc
gggactggattgggtcttaatctgtgcaatcagctcgtcagtttgatgggcggagagatt
ggtgttgaaagtgagcccggcaagggcagccttttctggtttgaaattccatttccgatt
taccatagggacaaggagcctgctttgctcccgggcgagttgcaaggacagcgtgcgctt
gtggtggatgacaacgatacctctcagattattcttaaagggatgttggagcacatgggg
ctgcgtgtcgctcttgccggttcgggagaagaggcgcttgagatattgcgtaatgtcccc
aaagaagaggcgttcaaccttttggttattgattggcgtatgcctgggaggaacggtatc
cagactgctggggccattttgtcggatgaatccatatctcccaagccccccatgttcatg
gtttcagcgtatggcaatgcttcgttggtgaaaaaatccaatgaaatgggttttaagggg
ttgttgtttaagcctgtgaaccaatcatttctctttaatctcgttgttgaaaccctcggt
aaaggtatggtgacaaccagtgactccgtggtccgtgaaggcgttacggacaatttgggc
ggggccagagtgttgcttgttgaagataatgaaatcaatcgtcaggtggctttggagatt
ttggcgtctgcaaaaattaaagtttttgaagccgtcaatggacaggctgctttggacttt
ctcgccaagactcctgtagatcttgtcctcatggatgtgcagatgcctattatggatggg
tacgaggcgactcgtcgactgcgtgaacaggatcggttcaatgatttgccgattattgcc
atgacggcccacgccatggttgaggacattgaacggagtcagtccgtgggtatgaacgga
catgtggccaaaccttttgatcctgaggatctttttaaggtccttgcgcagtggattgag
ccgacatctgttcatcagtcacgaccgttacctctgaccgaagagcctgtacttggcgat
tcacttccggcctccatggacggtattgatgttcaacttggactgcgacgagcgaggggc
aacaaggagttatacaaaaaccttcttttgttattggatgaaaagtattctgatgctgct
caggaaatcgagcaggcgagagctgaagggcgacttgaggaggctgtagggcttgctcac
tcggtaaaaggcacatctgggatgcttggtgccatggagttgtttgagtcgtccagcgac
ttggagcacgcgttggacgagtcctctgatgatgtgcaagaaaagctggagcggttttcg
tacgatatgtcagtggtaatgcagagcattgcagtgattaaggaaatagaaggcaccaag
actgtcctcaaacaggtgggcgaggtcgctgatgctgctgatttactggcgtcgctggag
gctctcaaggtgccattgtccgaaggggcccctgtcgtatgtcggaagaaggcaaaagac
gttcaagtgcttgtatggcccggagaattgcatgatgatgtcgtacggatgctgaaactc
atcgcagaatatgattttaagaaagctttggtcttggttaaggacttggaaaagcgcatg
gtttga
DBGET
integrated database retrieval system
