Pseudodesulfovibrio nedwellii: SYK_11050
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Entry
SYK_11050 CDS
T09024
Symbol
carB
Name
(GenBank) carbamoyl-phosphate synthase (glutamine-hydrolyzing)
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
pnw
Pseudodesulfovibrio nedwellii
Pathway
pnw00220
Arginine biosynthesis
pnw00240
Pyrimidine metabolism
pnw00250
Alanine, aspartate and glutamate metabolism
pnw01100
Metabolic pathways
pnw01110
Biosynthesis of secondary metabolites
pnw01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
pnw00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
SYK_11050 (carB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
SYK_11050 (carB)
00220 Arginine biosynthesis
SYK_11050 (carB)
Enzymes [BR:
pnw01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
SYK_11050 (carB)
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Ortholog
Paralog
GFIT
Motif
Pfam:
CPSase_L_D2
CPSase_L_D1
CPSase_L_D3
MGS
ATP-grasp
Dala_Dala_lig_C
ATPgrasp_Ter
ATP-grasp_3
ATP-grasp_4
ATP-grasp_LDMS
CoA_binding_2
Motif
Other DBs
NCBI-ProteinID:
BDQ36745
UniProt:
A0ABM8AYZ1
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All DBs
Position
complement(1161990..1165223)
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AA seq
1077 aa
AA seq
DB search
MPRRTDIKKIMLIGSGPIVIGQACEFDYSGTQALKALKEEGYEVVLVNSNPASIMTDPEL
ADATYIEPLEPETVARIIEKERPDALLPTLGGQTGLNTALAVAEMGVLDKYNVELIGADI
PVINKAESREEFRTAMNNIGLGMPESGICRTMDDVREWGEKIPFPIIVRPAYTLGGAGGG
VAYNMEELEEICSNGLALSMKSEIMLERSILGWKEYELEVMRDKNDNCVIICSIENLDPM
GVHTGDSVTVAPAQTLTDDEYQKLRDASLAVMREIGVETGGSNVQFAINPEDGEVIIIEM
NPRVSRSSALASKATGFPIAKIAAKLAVGYTLDEIPNDITRETMASFEPAIDYCVIKIPR
FTFEKFPGTEDYLTTAMKSVGETMAIGRTFKEALQKGLRSLETGHIGLGKRFETCDIDKN
EILRLLRRPNSERLFALRNALRCGMTEDEVFEATKIDPWFIRQFVDIFEMEKKLIEYGKR
EGVSKDADGMDEMLRRAKEYGYADAQLAAMWRTSEDAIRTLRKELDIIPTYYLVDTCAAE
FEAYTPYYYSTYETGQENVRDEKKKVVILGGGPNRIGQGIEFDYCCCHSSFTLKELGVQS
IMVNSNPETVSTDYDTSDKLYFEPLTFEDVMNIIEFEKPDGVIVQFGGQTPLNLALRLMD
AGVPLIGTTPDAIDRAEDRERFKQFLNKLHLKQPSNGTAMSMVEAREIAESLDFPLVLRP
SYVLGGRGMDIVYTMDEFDHYFRHSARISPEHPTLIDKFLEYAIEVDVDALADGEDVYIG
GVMEHIEEAGIHSGDSASVLPPYSLSGELIREIERQTTVMAKELGVVGLMNVQFAIKDNE
VYIIEVNPRASRTVPFVSKATGVPLAKLATRVMLGEKLKDLKPKAMRKKGHVSVKESVFP
FSRFPNVDVLLGPEMRSTGEVMGIDPSFGLAYMKAQLAAGQKLPLEGTVFMSVNDWDKSK
IVLVARDFEAMGFRVCATGGTADFLAEKGVNVEKVYKVHEGQRPHVVDHIKNGEFDLVIN
TPSGKKTVSDAKMIRQNTLLYDIPYTTTVSGAKAIAQAILEVRETGLKVQSLQKYYG
NT seq
3234 nt
NT seq
+upstream
nt +downstream
nt
atgcccagacgtacagacatcaaaaagattatgttgatcgggtccggcccgattgttatc
ggccaggcttgcgaattcgattattctggaacccaagcgcttaaagcgctcaaggaagaa
ggatacgaagtcgttctggtcaattccaaccctgcgtcgattatgaccgacccggagttg
gccgatgccacttacatcgaaccccttgagcccgaaacagtagcccgaatcatcgaaaaa
gagcgtcccgacgctcttttgccgactttggggggacaaactggtttgaacaccgctttg
gccgtggccgaaatgggagtgttggacaagtacaacgttgaacttatcggtgcggatatt
ccggttatcaacaaggcggaatcccgagaagaatttcgtacggccatgaataatatcggt
ctcggtatgcccgagagtggtatttgtcgtaccatggatgacgtgcgagaatggggtgag
aagatcccgtttccgattatcgttcgtcccgcctatacgttgggcggtgccggtggtggc
gttgcctacaacatggaagagcttgaggaaatttgttccaatggcttggccctgtccatg
aagagcgagatcatgcttgaacgttccatccttggttggaaggaatacgagcttgaggtc
atgcgtgacaaaaacgataattgcgtgatcatttgttccatcgaaaacttggaccctatg
ggtgtacacactggtgattccgtgaccgtggctccggcccagacgctcactgatgacgaa
tatcagaaattgcgtgatgcctctttggctgtcatgcgtgagattggtgttgaaacgggt
gggtcaaacgttcagtttgctatcaatcccgaggatggcgaggtaatcatcatcgagatg
aatccccgtgtgtcccgttcttcggctctcgcttccaaggcaaccggatttcccattgcc
aagattgcggccaagttggcagtcggctatacgctcgacgagattcccaacgatattact
cgcgagaccatggcctcctttgagccggccattgattactgtgtcatcaagattccaaga
ttcactttcgagaagttccccggcaccgaggattatttgaccacggccatgaagtccgtg
ggtgagaccatggctatcggtcgaactttcaaggaagcattgcagaaaggtttgcgttct
ttggaaaccggacacatcggtttaggtaagcgttttgaaacttgcgacatcgacaaaaat
gaaattttgcgtctgctccgtcgtcccaactctgaacgtctgtttgctctgcgtaatgcg
ttacgctgcggaatgactgaagacgaagttttcgaagccaccaaaatcgacccatggttc
atccgtcagttcgtagacatttttgagatggagaaaaagctcattgaatatggcaagcgt
gagggcgtttccaaagatgctgatggcatggatgaaatgctccgtcgagccaaggaatat
gggtatgccgatgcgcagcttgccgccatgtggcggaccagtgaggatgcaatccgcact
ttgcgcaaggaattggatataattccgacctactatcttgttgatacctgcgccgcagaa
tttgaagcatacacgccgtattattattctacctacgagaccgggcaggaaaatgtccgt
gacgagaaaaagaaagtcgtcattctgggcggcggtcccaaccgtatcggtcagggcatt
gagttcgactactgctgctgccactcttccttcactttgaaggagcttggcgtacagtcc
attatggtcaactccaatccggaaacggtctccactgactatgatacctcggacaagctt
tattttgagccgctgactttcgaggatgtcatgaacattatcgagtttgaaaagccggac
ggtgttattgttcaatttggcgggcagactcctctcaatttggctttgcgtcttatggat
gcgggcgtgccgcttatcggtaccacccctgacgccattgaccgcgctgaagatcgcgag
cggttcaagcagttcctgaacaaactgcatttgaagcagccttcgaacggcacggccatg
tccatggtcgaggctcgtgaaatagctgaaagtctcgattttccgttggtacttcgccct
tcatatgtgttgggtggccgtggtatggacatagtctacaccatggatgaattcgatcat
tatttccgtcattcagcacgtatttcgccagaacatccgaccctcatcgacaagtttctg
gaatacgctatcgaggtggatgtcgatgcattggccgatggcgaggacgtctatatcggc
ggtgtcatggagcacatcgaagaggctggtattcattccggcgactctgcgtcggtgctg
cccccgtactccctgagcggagaattgattcgtgaaatcgaacgacagactacagtcatg
gccaaagagcttggcgttgtcggtttgatgaatgttcagttcgctatcaaggacaacgaa
gtttatatcattgaggttaacccgcgcgcttcccgtaccgtgccgtttgtgtccaaggcc
acgggtgttccgcttgccaagctcgctacccgcgtcatgcttggtgagaagctgaaagat
ttgaagcccaaggcaatgcgcaaaaagggccatgtgtccgtcaaggaatccgtgttcccc
tttagccgtttccccaacgtggacgtgctacttggacctgagatgcgttccaccggcgaa
gttatgggtatcgatccaagtttcggtttggcctatatgaaagcgcagttggcggcagga
cagaaactgcctttggaagggacggtctttatgtccgttaacgattgggacaagtccaag
atagttctggttgcccgtgactttgaggctatgggcttccgagtgtgtgccactggcggt
actgccgattttctggctgaaaaaggcgttaacgtcgagaaagtttacaaagttcatgag
ggccagcgtccccacgttgtcgaccatatcaagaacggcgaatttgacttggttatcaat
actccgtctggcaaaaagaccgtgagcgatgccaagatgattcgtcagaatacattgttg
tacgatatcccgtataccactacggtatccggggccaaggccattgctcaggccattctt
gaagtaagagaaaccgggctgaaagttcaaagcctgcaaaaatattacggctaa
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