Pseudodesulfovibrio nedwellii: SYK_11220
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Entry
SYK_11220 CDS
T09024
Symbol
selA
Name
(GenBank) L-seryl-tRNA(Sec) selenium transferase
KO
K01042
L-seryl-tRNA(Ser) seleniumtransferase [EC:
2.9.1.1
]
Organism
pnw
Pseudodesulfovibrio nedwellii
Pathway
pnw00450
Selenocompound metabolism
pnw00970
Aminoacyl-tRNA biosynthesis
pnw01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pnw00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
SYK_11220 (selA)
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
SYK_11220 (selA)
Enzymes [BR:
pnw01000
]
2. Transferases
2.9 Transferring selenium-containing groups
2.9.1 Selenotransferases
2.9.1.1 L-seryl-tRNASec selenium transferase
SYK_11220 (selA)
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GFIT
Motif
Pfam:
SelA
Se-cys_synth_N
DegT_DnrJ_EryC1
Cys_Met_Meta_PP
Beta_elim_lyase
Aminotran_5
Motif
Other DBs
NCBI-ProteinID:
BDQ36762
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Position
complement(1183527..1184936)
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AA seq
469 aa
AA seq
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MSQIFRYLPSVDQVLSSLEAIEDFRDLPRALIKDLVNDFLNVCREEIRSGAITTSEQLDL
TALLPRLVAFVRAQSRPHFRRVLNGTGVVIHTNLGRSLLAKSAIKAVAEACGHYSNCEFD
LSTGHRGSRYSHVEKILCDITGAEAALVVNNNAAAVFIMLETLAKGREVIVSRGQLVEIG
GSFRIPDVMTKSGAILHEVGATNRSHVHDYENAINDETGALMRVHTSNFRVVGFTKEVTL
PEMRELGDKYNLPVIEDLGSGSLYSLQGDGLLGEPTVQQTVAQGADVVSFSGDKVLGGPQ
AGIIVGRKEYIDRIKNNPVNRAMRIDKMTLAALEATLRLYLDMDEARRKVPTLKMITASQ
EALKSKARRLADAIRHSLGERAVVSMKKGVSRVGGGAFPEYDLPGTMVSIAVKNISVGDL
KDALLQTDPPLVARIEDDEFLIDPRTLASTELKMAASALEQAMVSLTEK
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atgagccaaatttttagatatcttccgtccgtggatcaggtcctttcttcccttgaggcc
attgaagattttcgagatctgccgcgtgctttgatcaaggatttggtcaatgattttttg
aatgtttgtcgagaggagattcgttccggcgccatcacaacatcggagcaattggacctt
acggcattgttgcctcggctggtcgcatttgttcgtgcgcagtcccgtccacatttcagg
cgggtacttaatggtacgggcgttgtcattcatacgaatttgggccggtcacttcttgcc
aagtccgccatcaaggctgtggcggaggcgtgcggccattattccaattgtgaatttgat
ttgtccaccggacatcggggtagccggtattctcatgtggagaaaattctgtgcgatatt
accggagctgaggctgcacttgtggtcaacaacaacgccgccgcagtctttatcatgttg
gaaaccttggccaagggacgagaggttatcgtgtctcgcgggcagctcgtggagatcggt
ggttcatttcgcatcccggatgtcatgaccaagtccggggccattttgcatgaagtcggt
gctacaaatcgaagccatgtccatgattacgagaatgctatcaatgatgaaaccggtgca
cttatgcgggttcatacgtccaattttagggtggtcggattcaccaaggaagtgacgctg
ccggaaatgcgagaactgggtgacaagtataatctgccggtaatcgaagatcttgggagc
ggttctctgtattcactgcagggtgacggtttgctcggtgaacccacggtgcaacagacc
gtggcacaaggtgcggatgtagtgtctttttccggtgataaagtgctcggtggtccgcag
gcgggtatcattgttggacgtaaggaatatattgatcgcatcaagaataatccggttaat
cgggctatgcgcatcgacaaaatgacgttggctgctcttgaggcgactttgcgactttac
ctcgacatggatgaagctcgacgcaaggttcctacgttgaaaatgattaccgcatcacaa
gaagcgctcaagagcaaggcgcgtcgtttggctgacgccattcgtcattctctcggcgag
cgagctgtggtttccatgaaaaagggagtatccagagtgggaggcggggccttccccgag
tatgatctgcccggtaccatggtttctattgccgtaaagaatatttccgtgggagatttg
aaggacgcgcttcttcagaccgaccctccgttggtggcgcgtattgaggatgatgagttt
cttattgatccacgtacattggcttcgacagaacttaaaatggccgcctccgcgttggag
caggctatggtttccctgaccgaaaaataa
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