Pseudodesulfovibrio nedwellii: SYK_12590
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Entry
SYK_12590 CDS
T09024
Symbol
pheT
Name
(GenBank) phenylalanine--tRNA ligase beta subunit
KO
K01890
phenylalanyl-tRNA synthetase beta chain [EC:
6.1.1.20
]
Organism
pnw
Pseudodesulfovibrio nedwellii
Pathway
pnw00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
pnw00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
SYK_12590 (pheT)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pnw01007
]
SYK_12590 (pheT)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pnw03016
]
SYK_12590 (pheT)
Enzymes [BR:
pnw01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
SYK_12590 (pheT)
Amino acid related enzymes [BR:
pnw01007
]
Aminoacyl-tRNA synthetase
Class II (U)
SYK_12590 (pheT)
Transfer RNA biogenesis [BR:
pnw03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
SYK_12590 (pheT)
Prokaryotic type
SYK_12590 (pheT)
BRITE hierarchy
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GFIT
Motif
Pfam:
B3_4
tRNA_synthFbeta
tRNA_bind
FDX-ACB
B5
DUF2113
Motif
Other DBs
NCBI-ProteinID:
BDQ36899
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Position
complement(1345433..1347832)
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AA seq
799 aa
AA seq
DB search
MLVSLNWLREFVPYEGDIQVLGDKLTMLGLELEGIDDPFENIKDIVVGHVVECEKHPEAE
KLSVCTVDVGGPEILTIVCGAPNVGKGQKVPVATVGTVMPEGMKIKKAKLRGIKSFGMIC
SERELGFSDDHDGIWVLDDTFSVGEKLVDVMNLERVVFDFDITPNRADCLSILGFARETA
LAFDLPLTMPELNLVEAGGNAADDLKILIDDPALCPAYHGRIIRGVETRKSPDWMRFKLL
ALGQRPISNIVDVTNYIMFELGQPLHAFDLDLIEDATIRVAPATDGMKFTTLDDVERTLT
SKDLLIWDGKKPVALAGVMGGANSEMHAESTSVLLEAAVFRPGTVRKTARRLSLPSDASY
RFERGVDQQLTRFCQDRAAQLMAEASGGSVVSGVVSNEPTPWQDRTHGYRHARCMSLLGL
DLEQDFAKKVFEGEGCAVDDSNADNWTVSSPSHRLDLEREVDLYEEVGRVFGLDQIPAVL
PRVSKSLDTVSSGTEYAFIKNIKLWGAGIGLNEAVNYSFVGSDDLDRLNLPEEGRVFIAN
PLSEDQNVMRTDLAPGLLNTLKNNLAQGNNHVRIFEVAKKFLADAESETETSEHIRLGVL
LYGPRHANEWPWGVESADYLDVKGHIEHLIVNHLKLEAPEFSLVEDHAYLEPCVQVIVNE
MPIGLIGRVKEDIADYYHARKEAWLGDLDLDALRSMTEEHAIEFAPLPVFPPSRRDVTVI
GSITLGADVIRKVIEEAGVSIMESVELVAEYVPEGQEEERNLSFRLTYRSPTKTLKDKQV
DKEHKKVLAALEKNLPIHF
NT seq
2400 nt
NT seq
+upstream
nt +downstream
nt
atgttagtcagtcttaattggttgcgtgagttcgttccctacgagggcgatattcaggtt
ctgggtgacaagctcaccatgttgggccttgagctggaagggatcgacgatccttttgag
aatatcaaggacattgtggtcggccacgttgtggagtgcgaaaagcaccctgaggccgaa
aagctttcggtctgtaccgtggatgtcggtggtcccgaaattttgaccatcgtttgcggt
gcgcccaatgttggcaaggggcagaaagttccggtagccactgttggtaccgtcatgccc
gagggtatgaagatcaagaaagccaagctgcgcggtatcaagtcgttcggtatgatctgt
tccgagcgcgaactcggtttttccgacgaccatgatggcatctgggttctggatgacacc
ttctcggttggtgaaaaacttgtggacgtcatgaatctggagcgtgtggtttttgatttt
gatatcacacccaaccgcgcagattgcctctccattctgggttttgctcgtgagactgca
ttggcatttgatctgcctttgactatgccggagttgaatctggtggaggctggtggcaac
gctgccgacgatttgaaaattttgatcgatgatccggcactgtgcccagcatatcacggt
cgtattattcgcggcgttgaaacacgtaagtctcctgactggatgcgtttcaaattgctt
gcactgggacagcgtccaatatccaatattgttgatgtgaccaattatattatgtttgag
ctgggacagccgcttcatgcctttgatcttgatttgattgaagacgctaccattcgtgta
gctccggcaactgacggcatgaaatttactactttggatgatgtcgagcgcaccttgact
tccaaggatctccttatatgggatggtaagaagcccgttgctcttgcaggtgttatgggt
ggtgccaattccgagatgcacgccgaatccaccagtgttttgttggaagctgccgttttc
cgtccgggtactgttcgcaagaccgcccgtcgtttatcattgccgtctgatgcatcttat
cgctttgagcgcggcgtggatcaacagttgacccgtttctgtcaggaccgtgcagctcag
ctcatggctgaagcttccggcggttccgttgtctccggtgtggtttccaatgagccgact
ccatggcaggaccgtacacatggctatcgtcatgcgcggtgcatgtccctgctcggtctt
gatttggaacaagatttcgccaaaaaagtttttgagggcgaagggtgtgccgttgatgat
tccaatgctgataattggactgtttcttctccgtcccatcgcctcgaccttgagcgcgaa
gtggatttgtacgaggaagtgggccgcgtttttggcctggatcagattccggcagttctg
ccgcgggtttccaagtctttggatactgtttcaagcggtactgaatatgcttttatcaag
aatatcaagttgtggggtgccggtattggtctaaatgaagctgtgaattacagctttgtt
ggctccgatgatctggatcgccttaaccttccagaagaagggcgggtatttattgccaat
cctttgagtgaagaccagaatgtcatgcgtactgatctcgcgcctggcctgctgaacaca
cttaaaaataatctggcgcagggtaacaaccacgttcgtatttttgaagtggccaagaaa
tttctggccgatgccgaatctgaaaccgagacttccgaacatattcgtttaggagttttg
ctctacggtccgcgtcatgccaatgaatggccgtggggtgtagagagtgcagactatctt
gatgtcaaagggcatattgaacatctcattgtgaatcatctcaagctggaagctcctgaa
tttagtttggtcgaagaccatgcctatttggagccgtgcgtgcaggtgatagttaacgag
atgccgattggtctcattggtcgcgtcaaagaagacatcgcggattattatcatgcccgg
aaagaggcatggctgggcgatcttgatcttgatgccctgcggtccatgactgaggagcac
gcaatcgagttcgcaccgctgcctgtgtttccgcccagtcgtcgtgatgtgaccgttatc
gggtctatcacccttggggccgatgtaattcgtaaggttattgaggaagcgggcgtcagt
atcatggagtccgtggaactggtggctgaatacgtgcctgaaggtcaggaagaggaacgc
aatttgtctttccgtttgacgtatcgttcgccgaccaaaactttgaaggacaagcaagtt
gataaggaacataagaaagtgctggctgctctcgaaaagaatctgccgatacacttctag
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