Pseudodesulfovibrio nedwellii: SYK_13060
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Entry
SYK_13060 CDS
T09024
Name
(GenBank) hypothetical protein
Organism
pnw
Pseudodesulfovibrio nedwellii
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Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
Motif
Other DBs
NCBI-ProteinID:
BDQ36946
UniProt:
A0ABM8AZI1
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Position
1396661..1399312
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AA seq
883 aa
AA seq
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MSLKERLNFDKEPIFLIDGTALLYRAFYARADLSRSDGFPTNAINTVLRVLMNMLRDEQP
KHVAFMMDGRGKTFRNDLYDKYKANRPPMPEGLAEQIAPVQEGVQLLGLKLLVSDGVEAD
DCICALANKYKADRPVIIMASDKDLKQCLDTNVAMVSQHGRKETLYTLDGFREKEGMEPA
TWPDFQAVIGDSADNIPGIPKIGPVTARKIFAETGPTLEDLRDNVDKLPEKLRAKVEPEM
ETVFMFRDLTRMKTDCCDNPVDDFIVQDMDVDALHAFLEEYELRGLQRDLPRNTATQTAT
SAPAASSPKAAQDGGMLSLFGETPATPKVEAPLAMTEAPTVGDLPNLAGEDVGVVFEKKA
FFIGMEGKEYRYTGDVADLVRALADASVIATPSVQDLLRADSAWNYILASQWFDLSLATY
LLDPESRNYTWARLKQSIHHDGRSEFAEAAKGLHPQSQGLAALVYMQGIQGQVKSAELEP
LMHDLELPLIPVLVSMEQAGIAVDLEAFKGFLDDVSAQLAELTRTIIGHAGEEFNIRSSQ
QLAVVLFDTLGIKAGSKTSTGLRSTANQVLEKIRDQHPIVEAVLEYRMLEKLRSTYLEPL
PKLVDKESRLHTHFNQLSTATGRLSSSQPNLQNIPIRGVHGPRMRACFNAKEGHLLAAAD
YSQIELRVLAHFSKDPALIDAFRHDEDIHSRTAALLNDKTVEEVTSDERRGAKTINFGLI
YGMGVQKLARELKIKQTEAKEFTEKYFEKMATLKAYYDTIVEDAQKHGFVATLAGRRRLL
PELHSRNNQLQSQAKRQAVNTVIQGSAADIIKMAMLAAHADAELKTLGAQLILQVHDELI
IEAPQENIEAAGARLKTIMQDVASLDVPLKVDLGIGLNWAEAH
NT seq
2652 nt
NT seq
+upstream
nt +downstream
nt
atgtcgctgaaagaacgccttaatttcgataaggaacctatttttcttatcgacggtacc
gccctgctctatcgcgccttctacgctcgcgccgacctgtcacgttcggacggattcccg
accaacgcgatcaatacggttctgcgtgtgctcatgaacatgctccgggatgaacagccc
aaacatgtagcattcatgatggacggtagggggaaaaccttccgcaacgacctgtacgac
aaatacaaggccaatcgtccgcccatgcccgaagggctggccgaacagattgcgccagta
caggaaggcgttcagttactcggcctcaaactgcttgtctcagacggcgtagaagcggac
gactgcatctgcgcactcgccaacaagtacaaggcggaccgcccggtcatcatcatggcc
tcggacaaggacctcaagcagtgccttgataccaacgtggctatggtcagccagcacgga
cgcaaggaaaccctctatacactagacggattccgcgagaaggaaggcatggagccagcc
acatggccggatttccaggccgtaatcggcgactcggcagataatattcccggtattccc
aaaatcggcccggtcacggcgcgaaaaattttcgccgaaaccggtcccacgcttgaggac
ctgcgcgacaacgtggataagctcccggaaaagctccgcgccaaggtggagccggaaatg
gaaacggtattcatgttccgcgacctgacccgcatgaagaccgattgctgtgacaatccg
gtggatgatttcattgtgcaggacatggatgtggacgcgcttcacgcatttttggaagag
tatgaactgcgaggcttgcaacgcgatctacccagaaacacggcaacacaaacagcgaca
agcgccccggccgcatcctccccaaaagcggcacaggacggcggcatgttgtccctgttc
ggcgaaaccccggcaaccccgaaggtcgaagcacctctggctatgaccgaggccccgact
gtcggcgatctgcccaatttggcgggcgaagacgtgggtgtggtctttgagaaaaaagca
tttttcattggcatggaaggcaaggaataccggtataccggtgacgttgccgatctggtt
cgcgcattggccgatgcttcggtgatcgcgaccccgtccgtgcaggatttgttacgtgcc
gattcggcatggaattatattttggcaagccaatggttcgacctgagtctggccacatat
ctgctcgacccggaatcacgcaattatacgtgggctcggctcaagcaatccattcaccat
gatggccgctctgaatttgcagaagctgccaagggattgcacccgcaatctcagggattg
gccgcgcttgtgtatatgcaaggtattcagggacaggtgaaaagtgcggagcttgaaccg
cttatgcacgaccttgaattgccgctcatcccggtgcttgtttccatggagcaggctggt
attgccgttgaccttgaagcgttcaaaggatttctcgatgacgtcagcgcacaactggct
gagctgacccggaccatcatcggccacgccggagaggaattcaatatccgctccagccaa
cagttggccgtagtcctgtttgatacactcggtatcaaagcgggatcaaagacgagtacg
gggttgcgttccactgccaaccaagtgttggaaaagattcgagatcagcaccccattgtc
gaagcagtgctggaataccgcatgttggaaaaactgcgctccacctatcttgaaccactg
ccgaaactggtggacaaggaatcgagactgcacacccatttcaatcagttgtccacggcc
actggccgactgtccagctcgcagccgaacctgcaaaacatcccgattcgcggggtacac
ggcccacggatgcgcgcctgtttcaatgcgaaagaaggccatctgttagctgcggctgat
tactcgcagattgaattgcgcgtactggcacacttttccaaagacccggccctgattgat
gcattccgccatgacgaggacatccactcgcgtacagcggccctgctcaatgacaagacg
gttgaagaagtgacatcggatgaacgacgcggcgcaaagaccatcaacttcggcctgatc
tacggcatgggcgtccaaaaactggcccgcgagctgaaaatcaaacagaccgaggccaag
gaattcacggaaaagtatttcgaaaaaatggcgaccctcaaggcctactacgacaccatc
gtggaagacgcccagaaacacggctttgtggcaaccctcgccggacgccgccgcctgctc
ccggaactccactcccgcaataaccaactccagtctcaggccaaacggcaagccgtcaac
acggtcattcaaggctcagccgccgacatcatcaaaatggccatgctcgcggcccacgcc
gacgcagaactcaaaaccctcggcgcccaactcatccttcaggtacacgatgaactcatc
atcgaagccccacaggaaaacatcgaagccgccggagcacgcctcaaaaccatcatgcaa
gacgtagcaagcttggacgtccccttgaaggtagatttagggattggattgaattgggct
gaagcgcattaa
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