Pseudodesulfovibrio nedwellii: SYK_14480
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Entry
SYK_14480 CDS
T09024
Name
(GenBank) hypothetical protein
KO
K06949
ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.-
3.1.3.100
]
Organism
pnw
Pseudodesulfovibrio nedwellii
Pathway
pnw00730
Thiamine metabolism
pnw01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pnw00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
SYK_14480
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pnw03009
]
SYK_14480
Enzymes [BR:
pnw01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.100 thiamine phosphate phosphatase
SYK_14480
Ribosome biogenesis [BR:
pnw03009
]
Prokaryotic type
GTPases
SYK_14480
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RsgA_GTPase
ABC_tran
MMR_HSR1
ATP-synt_ab
Dynamin_N
AAA_28
AAA_29
AAA_33
nSTAND3
AAA_22
Septin
Motif
Other DBs
NCBI-ProteinID:
BDQ37088
LinkDB
All DBs
Position
complement(1559950..1560495)
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AA seq
181 aa
AA seq
DB search
MHRYYVYSDENELAIHLGDGKTAAMIGSSGAGKSTLANMLHGNEIQATGKISASVGKGRH
TTTVRELIRMPQGGLLMDNPGIREIAFHESGNGIENTFADICKLARTCRFADCTHRHEPH
CAVRHAVETGKLPQERLESFHKMQLEMQYLSERRTKSADRMEKGRWKGVAQKIKGLKKGK
K
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
gtgcacagatattacgtatattccgatgaaaacgagcttgcgatccatttgggcgatggc
aaaaccgctgccatgataggatcgtctggcgccgggaaatcaacactggcgaacatgctg
cacggcaatgaaatacaggccacaggaaaaatcagcgccagcgtcggcaagggacgtcac
acaaccactgtccgggaactcatccgcatgccgcagggcggtttgctcatggacaatccc
ggcatccgcgaaatcgcgtttcacgaaagcggcaacggcattgaaaacaccttcgccgac
atatgtaaattggccagaacgtgccgcttcgccgactgcacccaccgccatgaaccgcac
tgtgctgtgcgccatgcagtcgagaccggcaagctcccgcaagaacggctggaaagcttc
cacaagatgcagcttgaaatgcagtatctttccgagcgtcgcacaaaaagcgcggaccgc
atggagaaaggacgctggaaaggcgtcgcccaaaagataaaaggattgaaaaagggtaag
aaataa
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