Pseudodesulfovibrio nedwellii: SYK_14700
Help
Entry
SYK_14700 CDS
T09024
Name
(GenBank) ABC transporter
KO
K12541
ATP-binding cassette, subfamily C, bacterial LapB
Organism
pnw
Pseudodesulfovibrio nedwellii
Pathway
pnw02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
pnw00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
SYK_14700
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pnw02000
]
SYK_14700
02044 Secretion system [BR:
pnw02044
]
SYK_14700
Transporters [BR:
pnw02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
SYK_14700
Secretion system [BR:
pnw02044
]
Type I secretion system
Adhesin protein transporter
SYK_14700
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
Peptidase_C39
SMC_N
AAA_21
AAA_23
Pex24p
Motif
Other DBs
NCBI-ProteinID:
BDQ37110
LinkDB
All DBs
Position
complement(1593988..1596183)
Genome browser
AA seq
731 aa
AA seq
DB search
MPGGMPMPGQPVPIKVETDERLSPKDIDFQPPLVICLSIISRLLGKPVSSATLKAGIPQQ
EGVITAASIVRSADRIGIRAKTVYREKLRTITRLILPCILLLRGGNACVLVETTDKVARV
VIPGHGMAETEMPLEKLEEEYTGYAIFCHRNSKLDKRVSGLKLLKTKRWFWGVLGRFWPI
YKHVVGASIMTNIIIVASPLFVMNVYDRVIPNNAMETLWALAIGIAIAYIFDFLLKNLRS
YFVDVAGRNADVIIGSRIMNHLMSARLDHMPESAGAVANNIREFESLREFFGSSSLVALI
DLPFLFLFIFVIHFIGGPIAYPIFIAVPVVILVGLFLQIPFQRIIESHYKESTQKHALLF
EIVQGLETIKTSMAEGRMQARWESVVGMSAMSNSRAKIMANISISFSVFITQMVSVAVVI
IGVFLISKGELTVGGLIACNILSGRAMAPLSAVAGLLSRFQQSRMALNALDMLMEMPSER
PDEKETFHYGTIEPSITMTGVSFSYPGTDKAVLHDVNIKLSPGEKVGIVGRTGAGKTTLG
KLCVGLYQPVEGSVQVGDIDLRQMDVADLRRKVGYISQDSLLFYGTLKDNIAFGLPEADD
QSINYAAEISGVNDFVRDHPAGFGMMVGERGTSLSGGQRQAVTIARAVLPDPEILIMDEP
SSNMDNQSEFRLKERLRSFVEDKTLIVITHRHSMLDLIDRLVIMDRGKIVVDGPKQAVLD
GLKSGKIKVSL
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
atgcccggtggtatgcccatgcctggtcagccggtgccaatcaaagtcgagactgatgaa
agattgtcgccaaaggatattgattttcagccgccgcttgtaatttgtctttccatcata
agtcgattgcttggtaagccggtttcctcggccacgctcaaggctggtatcccgcaacag
gaaggcgtcattacagccgcgtccattgttcggtccgcagatcgcatcggcattcgggca
aagactgtttatcgtgagaagttgcggactattactcgactgattcttccgtgtatcctg
cttcttcgtggtggcaatgcctgcgtgcttgtggagacgacggacaaggtcgctcgtgtc
gtgattcctggccacggtatggccgagaccgaaatgccgcttgagaaattggaagaagaa
tacactggttatgccatattctgtcatcgtaattccaaacttgataagcgtgtgtcgggg
ttgaaacttctcaagaccaagcgatggttctggggtgtccttggtcgtttctggcctatc
tataaacacgttgttggcgcgtccatcatgacgaatatcatcattgtagcctcgccgctt
tttgtgatgaacgtctatgaccgtgttattccgaacaatgcaatggaaacattgtgggca
ttggccataggtattgccattgcttacatctttgatttcttgctgaagaatttgcgcagt
tatttcgttgatgtggctggtcgcaatgcggatgtcattattggcagtcggattatgaac
catctcatgtccgcccgccttgatcatatgccggaatccgcaggagccgtggccaataat
atccgtgagtttgagtcattgcgtgagttttttgggtcgtcatcgttggttgcgcttatc
gacctgccatttctgtttttgtttatttttgtcattcacttcatcggcggtccaatcgct
tatccgattttcatagcggttccggtggtcattttggtggggctgttccttcagattcct
ttccagcgtatcattgagagtcattataaggaatcaacacagaaacatgcgcttctgttt
gaaattgtacaggggcttgaaaccatcaagacgagtatggccgaaggtcgtatgcaggct
cggtgggagagcgtggtgggtatgtctgccatgtccaacagccgcgctaagatcatggcc
aacatttccatttccttctcggtttttattacccagatggtttcggtggcagtggtaatt
atcggcgtgttccttatttcaaaaggagagctgactgtgggtgggttgatcgcctgcaat
atcctgtcgggtcgggccatggcaccgttgagtgcggttgccggtttgctttcccgtttc
cagcaatctaggatggcgctgaacgctttggatatgcttatggaaatgcccagcgaacgt
cccgatgaaaaggaaacgttccattatggtaccattgaaccttccataaccatgactggc
gtttcattcagctatccggggacggacaaggctgttttgcatgatgtcaatatcaagctt
tctccgggtgaaaaggtcggtatcgtcggtcggaccggagctggaaaaactacccttggt
aaattgtgcgtcgggctgtatcaacccgttgaagggtctgtacaggttggtgatattgat
ttgcgtcagatggacgtggccgaccttcgcaggaaagtggggtatatctctcaggatagt
ttgcttttttatgggacgttgaaagataacattgctttcggtctgcctgaggcagatgat
cagtccattaattacgcggctgaaatttctggggtgaatgattttgttcgggatcaccca
gccgggtttggtatgatggtcggcgagcggggaacatccctgtccggcggtcaacgacag
gctgtaaccattgcccgcgccgttttgcccgacccggaaatcctgattatggatgagccg
tcgagcaacatggataatcagtcggaattcagactcaaggagcgactcagatcgtttgtc
gaagacaagacgcttatcgtaattacccaccgtcattctatgcttgatctcattgatcgg
ttagtcatcatggaccggggaaaaattgttgtggacgggccgaaacaggccgtattggat
ggacttaagtccggtaaaatcaaggtttccctctga
DBGET
integrated database retrieval system
