Pseudodesulfovibrio nedwellii: SYK_15860
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Entry
SYK_15860 CDS
T09024
Name
(GenBank) 1-deoxy-D-xylulose-5-phosphate synthase
KO
K00615
transketolase [EC:
2.2.1.1
]
Organism
pnw
Pseudodesulfovibrio nedwellii
Pathway
pnw00030
Pentose phosphate pathway
pnw00710
Carbon fixation by Calvin cycle
pnw01100
Metabolic pathways
pnw01110
Biosynthesis of secondary metabolites
pnw01120
Microbial metabolism in diverse environments
pnw01200
Carbon metabolism
pnw01230
Biosynthesis of amino acids
Module
pnw_M00007
Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P
Brite
KEGG Orthology (KO) [BR:
pnw00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00030 Pentose phosphate pathway
SYK_15860
09102 Energy metabolism
00710 Carbon fixation by Calvin cycle
SYK_15860
09109 Metabolism of terpenoids and polyketides
01051 Biosynthesis of ansamycins
SYK_15860
Enzymes [BR:
pnw01000
]
2. Transferases
2.2 Transferring aldehyde or ketonic groups
2.2.1 Transketolases and transaldolases
2.2.1.1 transketolase
SYK_15860
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Gene cluster
GFIT
Motif
Pfam:
Transket_pyr
Transketolase_C
PFOR_II
Transketolase_C_1
Motif
Other DBs
NCBI-ProteinID:
BDQ37226
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Position
complement(1730775..1731701)
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AA seq
308 aa
AA seq
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MSMRNDFIDALVEQAALDERIVLLTADLGYTVLEKFSDKFPDRYFNVGAAEQNMLGIAAG
MTASGLIPFVYSMTTFVTMRSFEFIRNGAALHQLPVRIIGVGGGFDYGHAGPTHHGLEDI
ALMRALQGVSIYCPLSNNHAQKLLANTWKTDGPIYYRISKDQIDLPNENEISVIPGELHC
VRKGENVAIIGLGRCCNEAIEAADALREQGINAAVYGAYSLSPSPEKALVEALNGIKTCV
VLEDHSINGGLGSLVAEGIAENRLGCKLIRAGSTGTPKKVCADYAMLKDINKMTTKDIVK
KTLSACNN
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatgagaaatgatttcatagacgctttggtggaacaggcggcgcttgatgaacgg
attgttttgctgaccgctgatttgggatataccgttcttgaaaagttttccgataagttc
cctgatagatattttaatgtaggtgctgccgaacaaaacatgctcggcatagcggcaggg
atgacagcctccggtcttattccatttgtttattccatgacgacttttgtgaccatgcgc
tcatttgaatttattcgaaacggcgcggctctgcatcaactgcctgtccggattataggt
gttggcggtggattcgattatggtcacgctggtccgacgcatcatgggttggaagatata
gccctcatgcgcgcattgcagggagtatccatatattgtccccttagtaataaccacgca
caaaagctccttgccaacacatggaaaacagacggcccgatttactaccgaatcagcaag
gatcaaatcgatctccctaatgaaaacgaaatttcggtgattcctggtgaattgcattgt
gtccgaaaaggtgaaaacgttgccattatcggcttggggcgttgttgcaatgaggccatt
gaagcggctgacgctcttcgtgaacaggggataaacgctgcggtgtatggtgcatacagt
ttaagcccttcccccgagaaagccttggttgaagcactcaacggcatcaaaacatgtgtc
gtgcttgaggaccattctatcaatgggggccttggttcacttgtggcagaaggcattgct
gagaatagacttggatgcaaattgatacgggcaggcagcacgggtactcccaaaaaggtc
tgtgctgactatgccatgttgaaagatatcaataaaatgaccacaaaagacattgtcaag
aaaaccttgtctgcttgcaacaattag
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