Pseudodesulfovibrio nedwellii: SYK_16690
Help
Entry
SYK_16690 CDS
T09024
Symbol
xseB
Name
(GenBank) exodeoxyribonuclease 7 small subunit
KO
K03602
exodeoxyribonuclease VII small subunit [EC:
3.1.11.6
]
Organism
pnw
Pseudodesulfovibrio nedwellii
Pathway
pnw03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pnw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
SYK_16690 (xseB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pnw03400
]
SYK_16690 (xseB)
Enzymes [BR:
pnw01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
SYK_16690 (xseB)
DNA repair and recombination proteins [BR:
pnw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
SYK_16690 (xseB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_S
Motif
Other DBs
NCBI-ProteinID:
BDQ37309
LinkDB
All DBs
Position
complement(1817573..1817815)
Genome browser
AA seq
80 aa
AA seq
DB search
MAKDTFEKKLERLKTVVEKLERGDQPLEEGVALYKEGLELVKGCGSQLENARNEVRIVSE
GLIKEFDALSELGDDAEEAS
NT seq
243 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaagatacgtttgaaaagaaattggaacggctcaaaactgtcgtcgagaagctg
gaacgtggcgatcagcctttggaagaaggtgtggccttgtacaaggaaggtcttgaactg
gtcaaaggatgcggttcccagttggagaacgctcgcaacgaagtcaggatcgtgtccgaa
gggctgatcaaggaattcgacgcattgagtgaactcggtgatgatgcggaggaagcgtcg
tga
DBGET
integrated database retrieval system
