Pseudodesulfovibrio nedwellii: SYK_17760
Help
Entry
SYK_17760 CDS
T09024
Name
(GenBank) penicillin-binding protein
KO
K03587
cell division protein FtsI (penicillin-binding protein 3) [EC:
3.4.16.4
]
Organism
pnw
Pseudodesulfovibrio nedwellii
Pathway
pnw00550
Peptidoglycan biosynthesis
pnw01100
Metabolic pathways
pnw01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
pnw00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
SYK_17760
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
SYK_17760
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pnw01011
]
SYK_17760
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pnw03036
]
SYK_17760
Enzymes [BR:
pnw01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
SYK_17760
Peptidoglycan biosynthesis and degradation proteins [BR:
pnw01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
SYK_17760
Chromosome and associated proteins [BR:
pnw03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
SYK_17760
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
PASTA
PBP_dimer_2
GntR
HTH_11
Motif
Other DBs
NCBI-ProteinID:
BDQ37416
LinkDB
All DBs
Position
1938467..1940428
Genome browser
AA seq
653 aa
AA seq
DB search
MAKDRKRRTDLSGIKIGLVIALFTVALTGLWARAGWVQLHDGEYLANKASKQSLAAECEY
GERGRIFDRNGQMLATSVEAKSIFARPYEIENIDIAADTLSRDLKLTRRTVYKKLKSKKK
FVWIKRQVTDREASAVAKADLPGIRLTSEFNRIYPNGHLAGQLLGFVDIDGQGREGMELV
FNKRMTPSKAEFVVQRDATGRRLYLDAHGREMDINGLDVTLTIDTHLQHAAEQALAKSIA
KYEARAGIVLVVDVKSGDILAMANQPFFNPNMVRVSKPSHRRLRPITDIYEPGSTMKPFL
FAAALEEGVIEPDTLINCENGRWRVARKVIRDTHPEKWLPAHKVLRYSSNIGCAKIGINM
GASVYHSYLTKLGFGEKTGLGLPGESSGIVMPATKWTSVDLAAISFGQGIGTTPVQLAKA
FLCIANGGITKDLNLVKQPRVERKNTATQVFSPETTAKVLSMMKDVVHEDGTGRRARIQG
ITMAGKTGTAQKASSKGGYGDQYLSSFVALVPADEPELLVITMIDEPQKSNYGSMVAAPV
CREVTVRTLAYHGKLSETLDTVVTENMSVDSLAEETLPQAASGPLAHVDTNAVPNITGMP
VRRALELLTKMGIVPVLKGQGMTVKSQKPAAGQPWPTDQNTEGTDDVFVLWLS
NT seq
1962 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaggacagaaaaaggcgcaccgatctaagcggaatcaaaatagggctagtcata
gccttgtttacggttgcgcttactggtttgtgggctagagccggatgggttcaactccat
gacggcgaatatttggccaacaaggcctccaaacaaagcctcgccgccgaatgtgaatac
ggtgaacggggtcgcatctttgaccgcaacggtcagatgctcgccacttctgtcgaagcc
aaatcaattttcgcccgtccctatgaaatcgaaaacatcgatatcgcagcagacaccctt
tcccgcgacctcaagttgacccgaagaacagtctacaagaaactcaaatccaagaaaaaa
tttgtctggataaaacggcaagttacagaccgtgaagcctctgctgttgccaaagctgat
ctgcccggcattcgcctgaccagtgaattcaatcgaatttatcccaatgggcaccttgcc
ggacagttacttggtttcgtggacatagatggtcagggccgggaaggcatggaactggtt
ttcaacaaacgaatgacgccaagcaaagcggagttcgtcgtacaacgtgatgccactggc
cgccgcttgtatcttgacgcccatggacgcgaaatggacatcaacggtcttgatgtcacg
ttgaccattgacactcatctccagcacgccgcagaacaagctcttgcgaaatccatcgcc
aaatacgaagcacgtgcgggcatcgtactcgtggtcgatgtaaaatccggcgacatcctc
gccatggctaatcagcccttcttcaatccgaacatggtacgcgtatccaaaccttcccat
aggcggctgcgccccattactgatatttacgaacccggttccaccatgaaaccgttcctg
ttcgctgcagctcttgaagaaggtgtgatcgaaccggacaccttgatcaactgcgaaaat
ggcagatggcgcgtggcccgcaaggtcattcgcgacactcaccccgagaaatggctgccc
gcgcacaaggtccttcggtattcctccaatataggctgcgccaaaatcggaataaacatg
ggcgcgagcgtctatcattcatacttgaccaagctcggcttcggcgagaagaccggcctc
ggcctgcctggcgaatcgtccggcattgtcatgcctgctacaaaatggacatccgttgat
ctggcggccatcagctttggtcagggaatcggaacaactcccgttcagctcgccaaggcc
ttcctctgcattgccaacggcggtatcaccaaagacctcaatctggtcaaacagcctcga
gttgaacgtaaaaacacggccactcaggtcttcagtcccgagaccacagccaaagtcctc
tccatgatgaaggacgttgtccacgaagacggcaccggccgtagagcccgcattcagggt
atcaccatggctggtaagacaggcacagcccaaaaagcctcttcaaaaggtggttacggc
gatcaatacctttcttcctttgtggctcttgttcccgccgacgagccggaactgctggtc
ataaccatgatcgacgaaccacaaaaatccaactacggctccatggtcgcggccccggtc
tgccgcgaagttaccgtgcggactctggcctaccacggcaagctgtccgaaacactcgac
accgttgttaccgaaaacatgtctgtcgattcgctggccgaagaaacactgcctcaagca
gcctctggacctctggcgcatgtcgataccaacgcggttccgaacattactggaatgccc
gttcgcagagctctggagttgttaactaaaatgggaatagtccctgtgctcaaaggccag
ggaatgacggtcaaaagccaaaagcccgcagccgggcaaccatggcccacggaccaaaac
acggagggtacggatgatgtttttgttctctggctctcatag
DBGET
integrated database retrieval system
