Pseudodesulfovibrio nedwellii: SYK_17780
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Entry
SYK_17780 CDS
T09024
Symbol
murF
Name
(GenBank) UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase
KO
K01929
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:
6.3.2.10
]
Organism
pnw
Pseudodesulfovibrio nedwellii
Pathway
pnw00300
Lysine biosynthesis
pnw00550
Peptidoglycan biosynthesis
pnw01100
Metabolic pathways
pnw01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
pnw00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
SYK_17780 (murF)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
SYK_17780 (murF)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
SYK_17780 (murF)
Enzymes [BR:
pnw01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.10 UDP-N-acetylmuramoyl-tripeptide---D-alanyl-D-alanine ligase
SYK_17780 (murF)
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Paralog
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
Motif
Other DBs
NCBI-ProteinID:
BDQ37418
UniProt:
A0ABM8B122
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All DBs
Position
1941929..1943317
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AA seq
462 aa
AA seq
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MNLTLADVERCLGGMAEEGHTQIVIASVKTDSRTVEKGDLFFCVSGENFDGHEFAAQAVK
QGAVAIVASRMLDDVDAPVIMVRDAVDALGRLAACWRDMCGAKLIAVTGTAGKTTVKEML
YAVASQKFNTAKNYRNFNNQIGLPLSMLKATVEQDLWIMELGISQRGDMEELAPIASPDI
AVITNVGPGHLKGLGNEAGVAHAKSTLLRYLRQPGSAIISMDYPLLWDAARELVDAPIGF
STNNDSHTSFVASFLGAGASNLGRFRLRTPEGEEEFEAPFCGEHYAENLACVAAVAHALG
MSRADVISGVQSLEPDTQRFCCKPNGDLMIIDDTYNANPLSMERSIETAANMADGKPLAL
VLGDMRELGDEAVMRHEELGRTIKDISPAVVFYKGNHFEDVAREYGKKMHKVDTQEDFAH
AWQSFGAADGVVLVKGSRSLKMELFVSALCAGRTVNAQGGKQ
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
gtgaatctgacattggctgacgtagaacgctgcctcggcggcatggccgaagagggccac
actcaaatcgtcatcgcttcggtgaagacggactctcgtacagtggaaaaaggcgacctg
ttcttctgcgtcagcggcgagaattttgacggtcatgaatttgcggcacaggccgtgaag
caaggtgctgtcgcgattgttgcttcacgtatgctggacgacgtagatgcacctgtcatc
atggtccgcgacgccgtagacgctctggggcgtctggccgcatgttggcgtgacatgtgc
ggagccaaactcatcgcagtcaccggcacagcgggaaaaaccacggtcaaggaaatgctc
tatgctgtggcctcacaaaaattcaacacggccaaaaactaccgtaatttcaacaatcag
ataggtctgcccctgtccatgctcaaagcaacagttgaacaagatctttggatcatggag
ttgggcatttcacagcgcggcgacatggaagaactggcccctatcgccagcccagacatc
gcggtcatcaccaatgtcggccccggccatctgaaaggactgggcaacgaagccggtgtc
gctcacgccaaatccaccctgctcaggtatctacgccagcccggttccgccattatttcg
atggactatccattactctgggacgctgcccgcgaactcgtggacgctcctatcggattt
tccaccaacaacgattctcacacctcctttgttgcctcgtttctcggggccggagccagt
aatctgggacgtttccggcttcggacccccgagggcgaggaagaattcgaggcaccattc
tgcggcgaacactacgccgaaaacttggcctgtgtagctgccgtggcccatgctctcggc
atgagtcgagcagacgttatttccggcgttcagtcgcttgaaccggacacccaacggttc
tgctgcaaacccaacggagacctcatgatcatcgacgacacgtacaacgccaaccccctt
tccatggaacggtccattgaaaccgcagccaacatggctgacggcaaaccattggccctc
gttctcggtgatatgcgcgaactcggagacgaagctgttatgcgccatgaggaactcgga
cgcaccatcaaggacatctccccggcggttgtcttctacaaaggaaaccatttcgaggac
gttgcacgagaatacggcaagaaaatgcacaaggtcgacacgcaggaagatttcgcccat
gcgtggcagtccttcggcgcggccgatggcgtggttctggtcaaaggatcgcgttccctc
aaaatggaactcttcgtgtccgccttatgtgcaggacgcactgtgaacgcccaaggaggc
aaacagtga
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