KEGG   Pseudodesulfovibrio nedwellii: SYK_17910
Entry
SYK_17910         CDS       T09024                                 
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
  KO
K00600  glycine hydroxymethyltransferase [EC:2.1.2.1]
Organism
pnw  Pseudodesulfovibrio nedwellii
Pathway
pnw00260  Glycine, serine and threonine metabolism
pnw00460  Cyanoamino acid metabolism
pnw00630  Glyoxylate and dicarboxylate metabolism
pnw00670  One carbon pool by folate
pnw00680  Methane metabolism
pnw01100  Metabolic pathways
pnw01110  Biosynthesis of secondary metabolites
pnw01120  Microbial metabolism in diverse environments
pnw01200  Carbon metabolism
pnw01230  Biosynthesis of amino acids
pnw01240  Biosynthesis of cofactors
pnw04981  Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:pnw00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00630 Glyoxylate and dicarboxylate metabolism
    SYK_17910 (glyA)
  09102 Energy metabolism
   00680 Methane metabolism
    SYK_17910 (glyA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    SYK_17910 (glyA)
  09106 Metabolism of other amino acids
   00460 Cyanoamino acid metabolism
    SYK_17910 (glyA)
  09108 Metabolism of cofactors and vitamins
   00670 One carbon pool by folate
    SYK_17910 (glyA)
 09150 Organismal Systems
  09154 Digestive system
   04981 Folate transport and metabolism
    SYK_17910 (glyA)
Enzymes [BR:pnw01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.2  Hydroxymethyl-, formyl- and related transferases
    2.1.2.1  glycine hydroxymethyltransferase
     SYK_17910 (glyA)
SSDB
Motif
Pfam: SHMT Beta_elim_lyase DegT_DnrJ_EryC1 VBS
Other DBs
NCBI-ProteinID: BDQ37431
LinkDB
Position
complement(1957249..1958487)
AA seq 412 aa
MEELLIQDPAVAAVIADEVDRQVSKLELIASENFVSTAVRQAQGSVLTHKYAEGYPGKRW
YGGCEHVDEVEDLARDRAKELFGATYANVQPHSGSQANMAVYFAACKPGDTVLGMDLSHG
GHLTHGSPVNFSGKLFNMVHYGVSKETQTIDYDAVEALAKENKPTMIIAGASAYPRVIDF
ARFRQIADEVGAKLMVDMAHIAGLIAAGEHPSCIEHAHYTTTTTHKTLRGPRGGMILSSE
DLEQELNSNIFPGIQGGPLMHVIASKAVAFGEALAPGFVEYQQQVVRNAKQLAVSLQEAG
YKLVSGGTDNHMMLLDLSEKDYTGKDAQIALDKAGITVNKNTIPFETKSPFQTSGIRVGT
PALTTRGMIEEDMIVVSEAIVAALNNMNDDKALKGISEEVEDFAREFPLFAW
NT seq 1239 nt   +upstreamnt  +downstreamnt
atggaagaactgcttatccaggatccggcagtagccgctgtcatcgccgatgaggttgat
cgtcaggtttctaaacttgaactgatcgctagtgaaaatttcgtgtccacggccgtgcgc
caagcacaagggtctgttttgacccataaatatgctgaagggtatcccggcaagcgttgg
tatggcggttgcgaacatgtggacgaggtcgaagacctggcccgagatcgtgccaaggag
ttgtttggtgctacctatgcaaacgttcagccgcactccggttctcaggcaaacatggct
gtctacttcgcggcttgcaagcccggtgatactgtgctgggcatggatttgtcccatggt
ggtcatctgacccacggttctccagtcaacttttccggcaagctcttcaacatggtccat
tacggtgtttccaaggaaacccagaccatagattatgatgccgtcgaagcccttgccaaa
gagaacaagccgaccatgattattgccggtgcttccgcgtatccgcgtgttatcgacttt
gcccgtttccgtcagatagctgatgaggttggtgccaagttgatggtggatatggctcac
atcgcgggtcttatcgccgcaggtgaacatccaagctgcattgagcacgctcattacacc
accaccacgactcacaagactctgcgcggtcctcgtggcggtatgatcctctccagcgaa
gatttggaacaggaactcaattccaacattttccccggcattcagggcggtccgcttatg
cacgtcatcgcctccaaggctgtggcttttggcgaagctttggctcccggtttcgtggaa
taccagcagcaggtcgtcaggaacgccaagcagcttgccgtgtccttgcaggaagccggt
tacaagcttgtatccggtggtactgacaaccatatgatgctgctcgatctgtccgaaaag
gactacaccggtaaggatgctcagatcgccttggacaaggccggtatcaccgtcaacaag
aacaccattccgtttgagaccaagtctccgtttcagacttcaggtattcgtgtcggtact
ccggctctgactactcgtggtatgatcgaagaagatatgatcgtggtatccgaagccatt
gtcgccgctctgaacaacatgaacgacgacaaggccctcaaaggcatctccgaagaagtc
gaagattttgctcgcgaattcccgctcttcgcttggtag

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