Pseudodesulfovibrio nedwellii: SYK_18150
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Entry
SYK_18150 CDS
T09024
Name
(GenBank) cytidine deaminase
KO
K01493
dCMP deaminase [EC:
3.5.4.12
]
Organism
pnw
Pseudodesulfovibrio nedwellii
Pathway
pnw00240
Pyrimidine metabolism
pnw01100
Metabolic pathways
pnw01232
Nucleotide metabolism
Brite
KEGG Orthology (KO) [BR:
pnw00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
SYK_18150
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pnw02044
]
SYK_18150
Enzymes [BR:
pnw01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.4 In cyclic amidines
3.5.4.12 dCMP deaminase
SYK_18150
Secretion system [BR:
pnw02044
]
Type II secretion system
Competence-related DNA transformation transporter (DNA-T) core components
SYK_18150
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
dCMP_cyt_deam_1
MafB19-deam
Bd3614-deam
HUTI_composite_bact
OTT_1508_deam
Motif
Other DBs
NCBI-ProteinID:
BDQ37455
LinkDB
All DBs
Position
1979958..1980416
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AA seq
152 aa
AA seq
DB search
MSNRLPWPEYFMRIAHLVAQRSTCTRRAVGAIAVRDKRILATGYNGVPTNIAHCEEVGCL
RDKLNIPSGERHELCRGLHAEQNVIIQAATHQLDLKGCDIYCTTKPCILCTKMLINCEVE
NIYFSENYPDELSEEMLAEAGVNYVFMEGEFI
NT seq
459 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaacagattaccttggcctgaatacttcatgcgcattgcccatttggtggcccag
cgctccacctgcacccgccgcgccgtgggtgccatagccgtacgcgacaagcgtatcctc
gcaaccggttacaacggtgtgcccaccaacatcgcccattgtgaagaggtcggatgtctt
cgcgacaagctcaacattccatctggagaacgccatgagctgtgccgggggctccacgcc
gaacaaaatgtcatcatccaggcagccacgcaccagttggacctcaagggatgcgacatc
tactgcaccaccaagccgtgtatcctttgcaccaagatgctcatcaactgcgaagtagaa
aatatatacttttccgaaaactaccctgacgagttatccgaagaaatgctcgccgaggct
ggagtgaactatgtgttcatggaaggcgaattcatctag
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