Pseudodesulfovibrio nedwellii: SYK_18260
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Entry
SYK_18260 CDS
T09024
Symbol
ribAB
Name
(GenBank) riboflavin biosynthesis protein RibBA
KO
K14652
3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:
4.1.99.12
3.5.4.25
]
Organism
pnw
Pseudodesulfovibrio nedwellii
Pathway
pnw00740
Riboflavin metabolism
pnw00790
Folate biosynthesis
pnw01100
Metabolic pathways
pnw01110
Biosynthesis of secondary metabolites
pnw01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
pnw00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00740 Riboflavin metabolism
SYK_18260 (ribAB)
00790 Folate biosynthesis
SYK_18260 (ribAB)
Enzymes [BR:
pnw01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.4 In cyclic amidines
3.5.4.25 GTP cyclohydrolase II
SYK_18260 (ribAB)
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.12 3,4-dihydroxy-2-butanone-4-phosphate synthase
SYK_18260 (ribAB)
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GFIT
Motif
Pfam:
DHBP_synthase
GTP_cyclohydro2
Motif
Other DBs
NCBI-ProteinID:
BDQ37466
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Position
complement(1989554..1990774)
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AA seq
406 aa
AA seq
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MALCKIEEAIEDIRQGKMVIMVDDEDRENEGDLVCAAEAVTPELINFMATYGRGLICLPM
NNEMADALGLELMAKKNESGFGTNFTVSIEAREGVTTGISAADRATTVLAAVEDGASPES
IVTPGHIFPLRAKDGGVLVRAGQTEGGSDIARLAGFKPAAVICEIMNEDGSMARMPDLEV
YAEKHDLKICSVADLIAYRMKFDGQSVTKVGEAKLPTRWGNFKSAAFNSEADGKTHIALY
MGDIHPDEPTLVRVHSECLTGDVFGSLRCDCGPQLADAMCMIRNEGKGVLVYMRQEGRGI
GLGNKIKAYHLQDQGYDTVEANVKLGFPPDLREYGTGAQILVALGVSKMRLMTNNPKKMV
GLEGYGLEVTERVPIEIGACKLNEKYLKTKQDKMGHLLHVNETGDE
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atggcactgtgcaaaattgaagaagccattgaggatatccgccagggcaaaatggtcatc
atggtggacgacgaggatcgtgaaaacgaaggcgatctcgtttgtgccgctgaagcggta
acaccggagttgatcaacttcatggctacatatggtcgtggtttgatctgtctgcccatg
aataatgaaatggctgacgctcttggcttggaactcatggccaagaagaacgaatccggt
ttcggaacaaatttcacggtctccattgaggcccgcgaaggtgtcaccaccggcatatct
gccgcagaccgtgccaccaccgtgctggccgcagtcgaggacggcgcatccccggaatcc
atcgtgacccccggacatatttttcctcttcgcgccaaagatggcggcgtgctcgtgcgc
gcagggcagactgaaggcggttctgacatcgcccgtctggccgggttcaagcccgctgcc
gtgatttgcgaaatcatgaacgaagacggttccatggctcggatgcccgaccttgaagtc
tacgctgagaagcatgatctcaagatttgctccgtggctgaccttattgcctatcgcatg
aagtttgacgggcagtccgtgaccaaggtcggcgaagccaagttgcccacacgctggggt
aacttcaaatccgccgcctttaattccgaagccgacggtaagacccatattgctctgtat
atgggcgatattcaccctgacgaaccgactctggtccgtgtgcattccgagtgcctgact
ggtgatgtgtttggttctctgcgttgcgattgtggtcctcagttggccgatgccatgtgc
atgattcgtaatgagggcaagggtgtgctggtttacatgcgacaggaaggacgtggtatc
ggtcttggtaacaagatcaaggcgtatcatttgcaggatcagggttacgacactgttgaa
gccaacgtgaaacttggtttcccgccggatctgcgtgaatacggcaccggtgctcagatt
cttgtagcgctcggcgtgtccaaaatgcgccttatgaccaacaatcccaaaaaaatggtt
ggtttggaaggctacggacttgaggtcaccgagcgtgtgcccatcgaaatcggtgcatgc
aagttgaatgaaaagtatctcaagaccaaacaagacaagatggggcacctgctgcatgtt
aatgagacgggcgacgaataa
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