KEGG   Pseudodesulfovibrio nedwellii: SYK_19320
Entry
SYK_19320         CDS       T09024                                 
Symbol
rnhB
Name
(GenBank) ribonuclease HII
  KO
K03470  ribonuclease HII [EC:3.1.26.4]
Organism
pnw  Pseudodesulfovibrio nedwellii
Pathway
pnw03030  DNA replication
Brite
KEGG Orthology (KO) [BR:pnw00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    SYK_19320 (rnhB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pnw03032]
    SYK_19320 (rnhB)
Enzymes [BR:pnw01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.4  ribonuclease H
     SYK_19320 (rnhB)
DNA replication proteins [BR:pnw03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    RNase H
     SYK_19320 (rnhB)
   Elongation factors (archaeal)
     SYK_19320 (rnhB)
SSDB
Motif
Pfam: RNase_HII CIP7_M
Other DBs
NCBI-ProteinID: BDQ37572
UniProt: A0ABN6S316
LinkDB
Position
complement(2105636..2106277)
AA seq 213 aa
MSQVTLFSVDGFTATEIAGVDEAGRGCLAGPVVAGACILPAEYDLPGMTDSKQLTAAKRE
VLYDLIREQAVAWAVGVAWAPEIDDINILQATFQAMGRAVRGMKAEPKFLQIDGNKTIPP
YALQCDIPQEYVIKGDGKIPAISAASIMAKTFRDRLMVQLAKRYPGYGISKHMGYGTKDH
MAAIQKFGPCRQHRLTFRGVKPEPKIQEQASLF
NT seq 642 nt   +upstreamnt  +downstreamnt
atgagtcaggtgacgttgttttctgttgatggatttaccgctaccgagattgcgggtgtg
gatgaggctggacgaggttgtctggctggtcctgtcgtggccggggcgtgtattttgcct
gcggagtatgacctgccaggaatgacggactccaaacagcttacagccgccaagcgcgaa
gtgctgtatgatcttatccgtgaacaggccgtggcttgggccgtgggagtggcgtgggca
ccggaaatcgacgatatcaatattttgcaggcgacctttcaggccatggggcgagccgtg
cgcggcatgaaagccgagccaaaattccttcagattgacggtaacaagactattcctccc
tatgccttgcagtgcgatatcccgcaggaatacgtcatcaagggtgatggtaagattccg
gccatttcggctgcatccatcatggcaaaaacatttcgtgatcgactcatggttcaactc
gctaaacggtatccgggctatggcatctccaagcatatgggatacggcaccaaagaccac
atggccgctattcagaaattcggcccgtgccgacagcaccgtctgacctttcggggcgtg
aagcccgagccaaaaattcaagagcaagccagcctgttttaa

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