Pseudodesulfovibrio nedwellii: SYK_19320
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Entry
SYK_19320 CDS
T09024
Symbol
rnhB
Name
(GenBank) ribonuclease HII
KO
K03470
ribonuclease HII [EC:
3.1.26.4
]
Organism
pnw
Pseudodesulfovibrio nedwellii
Pathway
pnw03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
pnw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SYK_19320 (rnhB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pnw03032
]
SYK_19320 (rnhB)
Enzymes [BR:
pnw01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.4 ribonuclease H
SYK_19320 (rnhB)
DNA replication proteins [BR:
pnw03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
RNase H
SYK_19320 (rnhB)
Elongation factors (archaeal)
SYK_19320 (rnhB)
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Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_HII
CIP7_M
Motif
Other DBs
NCBI-ProteinID:
BDQ37572
UniProt:
A0ABN6S316
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All DBs
Position
complement(2105636..2106277)
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AA seq
213 aa
AA seq
DB search
MSQVTLFSVDGFTATEIAGVDEAGRGCLAGPVVAGACILPAEYDLPGMTDSKQLTAAKRE
VLYDLIREQAVAWAVGVAWAPEIDDINILQATFQAMGRAVRGMKAEPKFLQIDGNKTIPP
YALQCDIPQEYVIKGDGKIPAISAASIMAKTFRDRLMVQLAKRYPGYGISKHMGYGTKDH
MAAIQKFGPCRQHRLTFRGVKPEPKIQEQASLF
NT seq
642 nt
NT seq
+upstream
nt +downstream
nt
atgagtcaggtgacgttgttttctgttgatggatttaccgctaccgagattgcgggtgtg
gatgaggctggacgaggttgtctggctggtcctgtcgtggccggggcgtgtattttgcct
gcggagtatgacctgccaggaatgacggactccaaacagcttacagccgccaagcgcgaa
gtgctgtatgatcttatccgtgaacaggccgtggcttgggccgtgggagtggcgtgggca
ccggaaatcgacgatatcaatattttgcaggcgacctttcaggccatggggcgagccgtg
cgcggcatgaaagccgagccaaaattccttcagattgacggtaacaagactattcctccc
tatgccttgcagtgcgatatcccgcaggaatacgtcatcaagggtgatggtaagattccg
gccatttcggctgcatccatcatggcaaaaacatttcgtgatcgactcatggttcaactc
gctaaacggtatccgggctatggcatctccaagcatatgggatacggcaccaaagaccac
atggccgctattcagaaattcggcccgtgccgacagcaccgtctgacctttcggggcgtg
aagcccgagccaaaaattcaagagcaagccagcctgttttaa
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