Pseudodesulfovibrio nedwellii: SYK_19830
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Entry
SYK_19830 CDS
T09024
Symbol
truA
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
pnw
Pseudodesulfovibrio nedwellii
Brite
KEGG Orthology (KO) [BR:
pnw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pnw03016
]
SYK_19830 (truA)
Enzymes [BR:
pnw01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
SYK_19830 (truA)
Transfer RNA biogenesis [BR:
pnw03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
SYK_19830 (truA)
Prokaryotic type
SYK_19830 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
NqrM
DUF2344
Motif
Other DBs
NCBI-ProteinID:
BDQ37623
UniProt:
A0ABM8B1C5
LinkDB
All DBs
Position
complement(2159192..2159938)
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AA seq
248 aa
AA seq
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MIRIRLTIAYDGTDYCGWQLQPNDRTVQGELEKALAVIMGGPVRVHGSGRTDSGVHALGQ
VVHFDCEEKCAAHPWRRSLNGLLPKDVRVVSQEVVPSDFHARYSAGSKTYEYTLWHERDF
CLPQRSRFVWNCGKVDLEAMEVAAQVLVGEYDFAAFQNKGTVVGTTIRLVNDISRHPGIT
EYESVWRFTAKGFLKQMVRNMIGCLVACGRGKLTPEDVLTILESRDRTLAPATVPPQGLT
LVRVEYPY
NT seq
747 nt
NT seq
+upstream
nt +downstream
nt
atgattcgcattcgacttactatcgcctatgacggcactgattactgtggctggcagtta
caacccaatgacaggaccgtgcagggagagcttgaaaaagcccttgcggtcattatgggt
ggtccggttcgtgttcatggttcaggacggactgactccggtgtccatgctctggggcag
gtggtgcattttgattgcgaggagaaatgcgcggcgcacccgtggaggcggagccttaac
ggtttgttgcccaaggatgttcgcgtggtttctcaggaagtcgttccgtcagattttcat
gcccggtattccgctggctcaaagacatatgaatatacactgtggcacgagcgagatttt
tgtctgcctcagcgtagtcggttcgtgtggaattgtggaaaggttgaccttgaggccatg
gaagtggctgcgcaagttcttgtgggtgaatacgactttgctgctttccagaataaagga
accgtggttggaacaaccattcggctcgtgaacgatatttcccggcatcccggcatcacg
gaatatgagtcagtctggcggtttactgccaaaggctttttgaagcagatggtgcgtaat
atgatcggttgtcttgtggcctgcgggcgcgggaaattgacgccggaagacgtgttgacc
attcttgaatcccgcgatcgcacattggctccagctactgtgccgccgcaagggttgacc
cttgtacgagttgagtatccctactga
DBGET
integrated database retrieval system
