KEGG   Pseudodesulfovibrio nedwellii: SYK_19910
Entry
SYK_19910         CDS       T09024                                 
Symbol
xth
Name
(GenBank) exodeoxyribonuclease III
  KO
K01142  exodeoxyribonuclease III [EC:3.1.11.2]
Organism
pnw  Pseudodesulfovibrio nedwellii
Pathway
pnw03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:pnw00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    SYK_19910 (xth)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pnw03400]
    SYK_19910 (xth)
Enzymes [BR:pnw01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.2  exodeoxyribonuclease III
     SYK_19910 (xth)
DNA repair and recombination proteins [BR:pnw03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    AP endonucleases
     SYK_19910 (xth)
SSDB
Motif
Pfam: Exo_endo_phos Exo_endo_phos_2
Other DBs
NCBI-ProteinID: BDQ37631
UniProt: A0ABN6S329
LinkDB
Position
complement(2167921..2168688)
AA seq 255 aa
MIIYSWNVNGYRAVIKKDFRDWLDGCGGDVVMLQETKAHPDQLGEDDREPDSYSNYYWNW
SKKKKGYSGVACFSNPEPMAVTMGLPDPRFQNEGRVLHLEYPDFHLFNIYFPNGQMSDER
LDFKMGFYDCFLEYAEELRKDKPIVVGGDFNTAHTEIDLKNPKPNSNRSGFLPSERAWID
KFIAAGYVDTFRMFEEGPHHYSWWSYRFNARKNNAGWRIDYFFVSEELKDKVVGAWIEPD
VMGSDHCPVAVEIDV
NT seq 768 nt   +upstreamnt  +downstreamnt
atgatcatctactcctggaatgttaacggctatcgtgccgtgatcaaaaaggattttcgc
gactggttggacggttgcggcggtgatgtggttatgctgcaggaaaccaaggcccacccc
gatcagctcggcgaagatgatcgcgaaccggattcctattccaattattactggaattgg
tccaagaaaaagaaaggctattccggtgtggcctgtttttccaacccggaaccgatggcc
gtgaccatggggcttcctgaccctcgttttcagaatgaaggccgtgtactccatcttgaa
tacccggattttcatctcttcaatatttatttccccaacggtcagatgtcggacgagcgg
ctcgacttcaagatgggcttctacgattgttttctcgaatatgctgaggaactgcggaag
gacaaacctattgtggtgggtggtgattttaataccgcacataccgagattgatttgaag
aatcccaaaccaaactcgaaccgttcaggctttttgcccagtgaacgagcgtggatcgat
aagtttattgctgccggttatgtggataccttccgcatgtttgaagaaggaccacaccat
tattcgtggtggtcttaccgttttaatgcccgtaaaaataatgcgggatggcgcattgat
tatttctttgtgtccgaagaattgaaagacaaggtcgtgggcgcatggatcgaacccgat
gtcatgggttcagaccactgccctgtggctgttgagattgacgtttag

DBGET integrated database retrieval system