Pseudodesulfovibrio nedwellii: SYK_20060
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Entry
SYK_20060 CDS
T09024
Symbol
dinP
Name
(GenBank) DNA polymerase IV
KO
K02346
DNA polymerase IV [EC:
2.7.7.7
]
Organism
pnw
Pseudodesulfovibrio nedwellii
Brite
KEGG Orthology (KO) [BR:
pnw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pnw03400
]
SYK_20060 (dinP)
Enzymes [BR:
pnw01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SYK_20060 (dinP)
DNA repair and recombination proteins [BR:
pnw03400
]
Prokaryotic type
TLS (translesion DNA synthesis) factors
Y-family DNA polymerases
SYK_20060 (dinP)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
IMS
IMS_C
IMS_HHH_1
IMS_HHH
POLH-Rev1_HhH
RecG_wedge
Cdd1
Motif
Other DBs
NCBI-ProteinID:
BDQ37646
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All DBs
Position
complement(2181897..2183084)
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AA seq
395 aa
AA seq
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MQNWILHIDMDAFFASVEQLDNPELRGKPVAVGGTSDRSVVSAASYEVRAFGVYSAMSVV
KARQLCPNIILVPGRMKRYKEISRQAMGVLREFSPTVEQASVDEAYLDGTGLERLFGPIE
EVCRRIKARMVEVTGLTCSVGAAPVRFLAKIASDMDKPNGIYIIRHDEASAFLQTLPVKK
IPGVGKKLVEILKRLGVRTCGDVLLKPRDFWEERLGKYGGALHDRARGIDPNPVMESSGA
KSCSAENTFHEDTTDRKILRKWLLTQSERVGADLRRHEYKGRTVTLKIKYADFKQITRSK
SLGGRTDETAVIFETVCELLEQLQLRRAVRLIGVGVSNFDSRTRQVTLFEESPHEAEATS
ELDKAVDEVRRKFGGKAVTRVELLGFRKKPAESDD
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atgcagaattggatactccacatagatatggatgcttttttcgcgtcagtggagcaactc
gataatcctgagttgcgcggtaagcctgtggctgtgggcggcacttcggatcgaagcgtt
gtatccgctgccagctatgaagtgcgggcttttggcgtgtactcggccatgagcgtggtc
aaggctcggcaattgtgtccgaatattattctcgtgccgggacgtatgaagcgttacaag
gaaatttcacggcaggccatgggcgtgttgcgggagttttcccctacggtagagcaggca
agcgtggatgaagcctatctggacggaaccggtctcgaacgtctttttggtcccattgaa
gaggtgtgtcgtagaatcaaggcccgtatggtggaagtcacgggattgacgtgttccgtt
ggagcggcccctgtccgctttttggcgaagattgcttcggatatggataagcccaatggt
atttatatcatacgacatgacgaggcctctgcctttttgcaaaccctgccggtgaagaag
attcccggtgtggggaagaaattggtggagatattgaaacgccttggcgtgcggacctgt
ggtgatgttttgcttaagccacgtgatttttgggaggaaaggcttggcaaatatggcggc
gcattgcatgatcgcgcgcgcggtatagatcccaatccggttatggagtcttccggggcc
aagagttgcagtgcggaaaacacatttcatgaggatacgacagatagaaaaatcctcaga
aagtggttgttaacccagtcggaacgcgtgggggccgatctgcgacggcatgaatacaag
gggcggactgtcacgctcaagattaaatatgccgacttcaagcagatcacgcggtcaaag
agtcttggaggccgaacagatgaaactgccgttattttcgagacagtctgtgaattgctg
gaacaattgcagttgcgtcgagcagtccggcttatcggtgtaggggtttccaacttcgat
tcaaggacgcggcaggtgactctttttgaagaatcaccacatgaggcagaggctaccagc
gagttggataaggcagtggatgaagtgcgccgcaagttcggtggaaaggccgttacccgt
gtggaactattgggattcaggaaaaaaccggcagagtctgatgattga
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