Pseudodesulfovibrio nedwellii: SYK_20070
Help
Entry
SYK_20070 CDS
T09024
Symbol
cbiA
Name
(GenBank) cobyrinate a,c-diamide synthase
KO
K02224
cobyrinic acid a,c-diamide synthase [EC:
6.3.5.9
6.3.5.11
]
Organism
pnw
Pseudodesulfovibrio nedwellii
Pathway
pnw00860
Porphyrin metabolism
pnw01100
Metabolic pathways
pnw01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
pnw00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
SYK_20070 (cbiA)
Enzymes [BR:
pnw01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.9 hydrogenobyrinic acid a,c-diamide synthase (glutamine-hydrolysing)
SYK_20070 (cbiA)
6.3.5.11 cobyrinate a,c-diamide synthase
SYK_20070 (cbiA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GATase_3
CbiA
AAA_26
DJ-1_PfpI
Motif
Other DBs
NCBI-ProteinID:
BDQ37647
LinkDB
All DBs
Position
complement(2183119..2184522)
Genome browser
AA seq
467 aa
AA seq
DB search
MSTLKAFIVAGTHSGCGKTSISLGLMASLVRKGVAVQPFKCGPDFIDPGHHALACARNGE
PVPSHNLDGWMLSESTNTDIFNRYGAECDVAIIEGVMGLFDGISGTADHGSTAQMSKNLG
LPVILVVDARSMARSAAALVSGYAGFDPDVNIAGVIFNRVGSDSHCELLHEAMSLVPDVP
VLGCLKRDEAIATPSRHLGLVTPDQEGPDMSRYQRLADWVETGLNLDSLLDALPDIEVVP
PFEPVPQLPSVTIGLARDNAFCFYYEENLRLLREAGARLIEFSPLEDTRLPEQLDGLYLG
GGYPELYVFELGQNNKLRREIKEFCESGRPVYAECGGFMYLMNDIITGRGRYAMSGVFPI
RAEMFEKFRALGYREVTTQADTVLGPAGTCARGHEFHYSSIQDDPCMQSLLSIYSMTGRK
GPIDTPEGFQVGNTLGSYVHMHFGSNPDMARNFVEECKQVFARAGQN
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atgagcactctcaaggcctttattgttgccggaacgcacagtggatgcggcaagacctcg
atttcgcttggtctgatggcgtcacttgtgcgtaaaggggtggccgtacagcccttcaaa
tgtggtccagattttattgatcccggccatcatgcgttggcctgtgcccgaaacggagag
cctgtacccagtcataatctggatggttggatgctcagtgagtcgaccaatactgatatt
tttaatcgatatggcgcagagtgcgacgtggctatcatcgaaggcgtcatggggttattc
gacggtatttccggtactgctgatcatgggtccacggcgcagatgtccaagaatctcggg
ttgcccgtcattttggttgtggatgcacgatccatggccagatctgcggctgcattggtt
tccgggtatgccggatttgatcccgatgtaaatattgccggggtcatcttcaaccgtgtg
ggcagcgattctcactgtgaattgcttcatgaagccatgtcattggtaccggatgttcca
gtgcttggctgtctgaaacgtgatgaagccatcgcaacaccatcgcgtcatctcgggctt
gtcaccccagatcaggaaggcccggatatgagtcgttatcaacggctggccgattgggtg
gagactgggctgaatttggattccctgctggacgccctgcctgatatcgaggtcgtgcca
ccgtttgagcctgtgccgcaattgccaagtgtgaccattggtctggctcgggataatgcc
ttttgcttttattacgaagaaaatttgcgactcctgcgtgaggccggagcacggttgata
gagttttcaccgcttgaggatacacgattgcctgagcaattggatggcctgtacctcggt
ggcgggtatcctgagttgtatgtctttgaattggggcagaacaacaagcttcgtcgggag
atcaaggaattttgtgaatccggtcgtcctgtctatgccgagtgcggtgggttcatgtat
ctgatgaatgacatcatcaccggacgggggcggtatgccatgtccggggtattccccatt
cgagcggaaatgttcgaaaagtttcgcgcattgggctatcgggaagtgactactcaggcg
gatacggtgcttggccctgccggtacttgtgctcgtggtcatgaatttcattattcttcc
attcaggatgacccctgcatgcaatcattgctttccatttattccatgaccgggcgcaaa
ggtcccatcgacacccctgagggttttcaggtgggcaatacacttggctcctatgttcat
atgcattttgggagcaaccctgatatggcgcgaaattttgtggaagagtgcaaacaggtc
tttgcacgggccggacagaattaa
DBGET
integrated database retrieval system