Pseudodesulfovibrio nedwellii: SYK_20100
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Entry
SYK_20100 CDS
T09024
Name
(GenBank) hypothetical protein
Organism
pnw
Pseudodesulfovibrio nedwellii
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
sCache_3_2
PAS
HAMP
PAS_9
PAS_8
PAS_3
Robl_LC7
DASH_Spc19
CHASE8
Baculo_PEP_C
Uds1
VPS38
Motif
Other DBs
NCBI-ProteinID:
BDQ37650
LinkDB
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Position
complement(2186789..2189362)
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AA seq
857 aa
AA seq
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MKAPKLFIKPLIFMVVVFGMIAVVTSLTFSNRIKREMTREYESKALALARSVAESDISTI
LSQDAGSVQSRIDQYQSIAGVSYVLVADEEGRILAHTFVPEVPDAVSHMVAETSFQHNQE
EHIIRNVRLDGEDFLHVTSPILTGIAGYVHIGMDMAVILRNIQEAVVEQQVVMLILFGAS
VLLAFIFVLNISKPLTQLSEYAGRVAVKDFTNVPDIKSNDEVGQLAKAMQAMTGQISELV
SNLEDRVRQKTHQLQDARDALKQKVEERTGELMRTNTQLKIEIAERKVIGDALRKAEKKY
RAIFENAVEGIYQSSPSGRFQDTNPALARILGYKSPEDLMSSIYDIGTQMYVDPSRRKEF
LHNFEDKDEIKNFISKVRKRDGRIIWIAENVRKIVDNEGNLICYEGSIEDITMRKKAEDQ
LKRQAFHDPLTGLPNRALFLDHLRMAMERSRRRKHMFAVLYMDLDRFKVVNDSLGHDAGD
ELLRGVARVLESCGRSVDTIARFGGDEFAILQEEISAPKDAIAIARRILEGVRQPFNIGG
NEVFTSASLGIVLKTDGYDRPEALLRDADTAMYRAKELGKSRFKVFNRKMHDQALQLMEL
ETDLRRAVDLREFEVYYQPIVRLDTRRVCGFEALVRWKHPEHGIIGPVDFISLAEDTGLI
YSIDNLVLEEACAQVKRWQTVLGVKSGSELTININISGKHFGHSMLGGQVARALEDSGLG
SDSLNIEITESALMDNPALAEEMLQHLKDIGVRICIDDFGTGYSSLSYLQRFPIDVVKVD
RSFVIDVETDADSQAIVRTVFSLGESLGLKIVAEGVETSGQLEFLENEGCKFVQGYFFYK
PMTVGEVDKLLASGTGT
NT seq
2574 nt
NT seq
+upstream
nt +downstream
nt
atgaaagctccaaaactttttatcaagccattgatctttatggtcgtcgttttcggcatg
attgccgtggtgacttctttgacgtttagtaatcggattaaacgtgaaatgacgcgcgaa
tacgagtcaaaagcccttgctttggcccggagtgtcgcagagtctgatatttcaacaatt
ttgagtcaggatgcggggtcggtgcagtcccgtatcgaccagtatcagtccatcgcaggc
gtctcgtatgttttggtggctgatgaagagggaagaatccttgcgcatacgtttgttcct
gaagtgccagatgctgtatctcacatggtcgccgagacatcttttcagcataatcaggaa
gagcatatcattcgtaacgtgcggttggacggcgaagattttttgcatgtgacaagcccg
attctgaccggtattgccggatatgtgcatatcggcatggatatggcggtcattctgcga
aatattcaggaagccgtggtcgaacagcaagtggtcatgctcattcttttcggggccagt
gttttgctggcgttcatttttgttttgaatatctccaagccattgacgcagttgtctgaa
tacgctggccgcgtcgcggtcaaggattttaccaacgtcccagatatcaagtccaatgat
gaagtggggcagttggccaaggccatgcaagccatgaccgggcagatatctgagctggtg
agcaaccttgaagatcgtgtccgacagaagacacaccagcttcaggacgcccgtgatgcc
ttgaagcagaaggtcgaagaacggaccggcgagcttatgcggaccaacacccaacttaag
atcgaaattgccgagagaaaggtgatcggagatgcccttcgcaaggctgagaaaaaatac
cgtgctatatttgagaatgccgtagagggcatttatcaatcttcgcccagcggtcgtttt
caggataccaatccggctcttgcccgtatcctcggatacaagtcgcctgaagaccttatg
agctccatttacgacattggtacgcagatgtacgtggacccgagtcggcgtaaggaattt
ttacataattttgaagacaaggatgaaattaagaatttcatctccaaggtacgtaagcgc
gatggccgtattatctggatcgcggagaatgtgcgtaagattgtggataacgaaggcaac
ctgatttgctatgaggggtctatcgaagacatcaccatgcgcaagaaggctgaagatcag
ttgaagcgacaggctttccacgatccgctgacggggttgcccaaccgcgccttgtttttg
gatcacctgcggatggctatggaacgttcccgtcgtcgtaaacatatgtttgcggtccta
tatatggatcttgaccgtttcaaagtggttaacgattccttggggcatgatgcgggtgat
gagcttttgcgcggcgttgcccgtgtcttggaaagttgtggtcggtccgtggatactatt
gctcgattcggtggtgatgaatttgctattttgcaggaagaaatttccgctcccaaagac
gccatcgccattgctcggcgtattcttgaaggggtgcgacagccgtttaatatcggtggc
aatgaagtctttacctcggcatccctcggaattgtactcaagactgatggctatgatcgt
cctgaggccttactgcgtgacgctgatacagccatgtaccgcgccaaggagttgggcaaa
tcccggttcaaggtgttcaatcgcaagatgcacgatcaggcattacagttgatggaactg
gagacggatctgcgccgtgccgtggatttgcgtgaatttgaggtgtactaccagcccatc
gttcggctcgatacgcgtagggtttgcggttttgaggcgttggttcgctggaagcatccg
gaacacggcattattgggcctgtcgattttatttctttggccgaggatacagggctaatc
tactcgatcgacaatcttgtccttgaggaggcctgcgcgcaggtcaagcgatggcagacc
gttcttggagtcaagtccggcagcgagttgaccatcaatattaatatttcagggaaacat
tttggtcattccatgctggggggacaagttgcccgtgccttggaagattctgggttggga
tcggattccctcaatattgagattactgaatccgctctcatggataatccggcccttgcc
gaagagatgcttcagcatttgaaggacatcggtgtcaggatttgcattgacgactttgga
acaggctattcttccctgtcctatctgcaaaggttccccattgatgtggtcaaggtggat
cggagttttgtgatcgacgtggaaactgacgcggatagtcaggccattgtgcgaactgtt
ttctctcttggagagtcccttgggcttaagatcgttgcagagggagtggaaacttccggg
cagttggagtttctggaaaatgaagggtgcaaatttgtccagggatatttcttctacaaa
cccatgaccgtgggagaagtggacaaactgctggcaagtggaacaggaacctga
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