Pseudodesulfovibrio nedwellii: SYK_21170
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Entry
SYK_21170 CDS
T09024
Symbol
cydB
Name
(GenBank) cytochrome c oxidase assembly protein
KO
K00426
cytochrome bd ubiquinol oxidase subunit II [EC:
7.1.1.7
]
Organism
pnw
Pseudodesulfovibrio nedwellii
Pathway
pnw00190
Oxidative phosphorylation
pnw01100
Metabolic pathways
pnw02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pnw00001
]
09100 Metabolism
09102 Energy metabolism
00190 Oxidative phosphorylation
SYK_21170 (cydB)
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
SYK_21170 (cydB)
Enzymes [BR:
pnw01000
]
7. Translocases
7.1 Catalysing the translocation of protons
7.1.1 Linked to oxidoreductase reactions
7.1.1.7 quinol oxidase (electrogenic, proton-motive force generating)
SYK_21170 (cydB)
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Motif
Pfam:
Cyt_bd_oxida_II
ABCC10_N
Motif
Other DBs
NCBI-ProteinID:
BDQ37757
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Position
2302181..2303230
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AA seq
349 aa
AA seq
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MENLIEIGSLHYYLAMIWFVLWGVLWAVYFILDGFDLGVGTLLPFLAKDEAEKRAMLNST
GPFWDGNEVWLIAAGGVTFAAFPYAYAQMFSGLYTALMLLLFTLIVRGVSFEFRSKVEHD
GWKKLWDTAHAVCSFLPALLLGVTFGNIFQGLPLDATGFSQAGLLGLLNPYGLAGGVLFV
VIFLMHGALWMTIRTTGELHTRAENLAIKLWPVEVVLTVLFLAFTAVSTKLFTNYLVYPI
LFVILLLPVAGLVLMRTYLGAKKYWMAWGASCLYIGGTALFGVVGIFPAIIPSNPSPANS
LTILNSSSSELTLTIMLGVAVIFIPLIIGYQFWAYKTLATPITDEDIHY
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atggaaaatctgatagaaatcggttcgctgcactattacctggcgatgatctggttcgtc
ctctggggtgtgctttgggccgtctatttcattctggatggctttgaccttggcgtgggg
accctacttcccttccttgcaaaggatgaagcagagaaacgggccatgctcaattccacc
ggcccattctgggacggcaacgaagtctggttgatcgcagcaggtggtgtcactttcgca
gccttcccatatgcatatgcccagatgttcagcgggctatacactgccctcatgctgctc
ttgttcaccctcatcgtgcgcggtgtgtcctttgaattccgttcaaaggtggaacatgac
ggctggaaaaaactctgggacaccgcccacgcggtctgttccttccttcccgccttgctt
ctcggggttacctttggaaacatcttccagggactgcctctggatgcaaccggattctcc
caggccggactactcggcctgctcaatccgtacggtcttgctggcggcgtgctgttcgtc
gtcatctttttgatgcacggcgcactctggatgaccatccgcactaccggcgaactgcat
acgcgggccgagaatttggccatcaagctctggccagttgaagtcgtcctgacggtcctg
ttcctcgccttcacagccgtgagcaccaagctgttcaccaactacctggtctacccgatc
ctcttcgtcatcctattgctgcccgtggccggcctggtgctcatgcgcacctacctcggc
gcgaagaagtactggatggcatggggcgcatcttgcctgtacatcggcgggacagcgttg
ttcggtgtagtcggtatcttcccggccattatcccgtccaacccaagcccggccaacagc
ttgaccattctgaattcctcatcgagtgaattgacgctgacaattatgctcggcgtggcc
gtgattttcatcccgttgattatcggttaccaattctgggcatacaagacccttgcaacg
cctatcacagatgaagatattcattactag
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