Pseudodesulfovibrio nedwellii: SYK_21450
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Entry
SYK_21450 CDS
T09024
Symbol
hisS
Name
(GenBank) histidine--tRNA ligase
KO
K01892
histidyl-tRNA synthetase [EC:
6.1.1.21
]
Organism
pnw
Pseudodesulfovibrio nedwellii
Pathway
pnw00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
pnw00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
SYK_21450 (hisS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pnw01007
]
SYK_21450 (hisS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pnw03016
]
SYK_21450 (hisS)
Enzymes [BR:
pnw01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.21 histidine---tRNA ligase
SYK_21450 (hisS)
Amino acid related enzymes [BR:
pnw01007
]
Aminoacyl-tRNA synthetase
Class II (A)
SYK_21450 (hisS)
Transfer RNA biogenesis [BR:
pnw03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
SYK_21450 (hisS)
Prokaryotic type
SYK_21450 (hisS)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_His
tRNA-synt_2b
HGTP_anticodon
tRNA-synt_2
tRNA-synt_2d
Motif
Other DBs
NCBI-ProteinID:
BDQ37785
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All DBs
Position
complement(2328148..2329458)
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AA seq
436 aa
AA seq
DB search
MASNGLTKFGSSDLTLIKDIERDMAKVQKIKGFVDLFPEEAAKFSFMESQAREAFTRYGF
GELRTPILEKTELFQKSIGEDTDVVGKEMFTFPDRKNRSLTMRPEATAGVVRAFIESKTH
QPGKVSKYFTFGPMFRYERPQKGRQRQFHQINAEIFGAPEAQADAELILMLRSFLNSLGL
TKLTIELNSLGCHECRPTYKQALVDYYLSKDKEQFCEDCQRRMETNPLRVLDCKVPACKE
LVADAPSITDHLCDECETHFTDVKTILDGAGVAYELNPRLVRGLDYYVRTCFEVASYDIG
SQTAVAGGGRYDGLIKNLGGADCPATGFACGMERLALLLDQMELDKPDFYLAVVDKGAAN
AAMLFAQQLRDKGLKGETSFSGGSMKSRMRAANKSGAKVCLIMGGDELTNETITVKYMEE
ERDQETLGRSEYLAKV
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
ttggcgtcgaatggtctaaccaaattcggttccagcgacctgacacttattaaggatatt
gaacgcgacatggcgaaagtacaaaaaatcaaaggattcgtggaccttttcccagaagag
gccgccaaattctcatttatggagtctcaggctcgtgaagccttcacgcgatatgggttt
ggcgaattgcgcacacctattttggaaaagacggaattgttccagaaatccatcggtgaa
gacacagacgtggtgggcaaggaaatgttcacttttcctgaccgcaagaatcgttccctg
acaatgcggcctgaagccacggcgggtgttgtccgtgcattcatcgaatccaagacgcat
cagcccggcaaggtttccaaatatttcacgttcggtccgatgtttcgctatgagcgccct
caaaagggccgtcagcgtcagtttcatcagattaatgccgagattttcggcgctcctgag
gcacaggctgatgccgagttgattctcatgctccgttctttcctgaacagccttggactg
accaagctgactatcgagctgaattcgctgggttgtcacgagtgccgtcctacctacaag
caggctttggtggattactacttgtccaaagacaaggaacagttctgcgaagactgtcag
cgccgcatggaaaccaatccgttacgtgttctcgactgcaaggttcctgcctgcaaggaa
ttggttgcggatgcccccagcattaccgatcacctgtgcgatgagtgtgaaacgcatttc
acggatgtgaagaccattctggatggcgccggcgttgcctacgagctgaatccccgattg
gtgcgtggattggattattatgtgcgtacctgttttgaggtggcgtcttatgatattggt
tcccagaccgctgttgcaggtggtggtcgatatgacggcctgatcaagaatcttggaggc
gcagattgtcctgccacggggtttgcctgtggtatggaacgactggctcttttgctcgat
cagatggagctggacaagcccgacttttatctcgcagtggtggacaagggcgcggccaat
gcggccatgctttttgcccagcagcttcgcgataagggactcaagggtgaaacgagtttt
tccggcgggtccatgaagtcccgcatgcgtgccgccaacaagtccggcgcaaaagtctgc
ctgatcatgggtggcgacgagttgacgaatgagaccatcaccgtcaagtacatggaagag
gagcgcgaccaggaaaccctgggccggtccgagtatttggcgaaagtataa
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