Pseudodesulfovibrio nedwellii: SYK_23800
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Entry
SYK_23800 CDS
T09024
Symbol
rlmN
Name
(GenBank) dual-specificity RNA methyltransferase RlmN
KO
K06941
23S rRNA (adenine2503-C2)-methyltransferase [EC:
2.1.1.192
]
Organism
pnw
Pseudodesulfovibrio nedwellii
Brite
KEGG Orthology (KO) [BR:
pnw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pnw03009
]
SYK_23800 (rlmN)
Enzymes [BR:
pnw01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.192 23S rRNA (adenine2503-C2)-methyltransferase
SYK_23800 (rlmN)
Ribosome biogenesis [BR:
pnw03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
SYK_23800 (rlmN)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RlmN_N
Radical_SAM
Fer4_12
Radical_SAM_2
Motif
Other DBs
NCBI-ProteinID:
BDQ38020
UniProt:
A0ABN6S7X4
LinkDB
All DBs
Position
complement(2579400..2580431)
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AA seq
343 aa
AA seq
DB search
MQNLIELTKNDLEAFVAEDLKEPRFRTEQIWQWLWQKRVRNIDAMTNLSKPLREKVATMA
TIAWPEIAKVATSKDGTIKLLLRMGDGALIETVLIPMNDRYSQCLSTQVGCAMACTFCNT
GKLGFERNLTYGEIMGQILVGRQYLEDQGMNPLKNLVFMGMGEPLLNLETLIKVLTDLPC
ERGLSLSWRRSMVSTVGFPDKLKILGDLEIALPAISLHAPTQELRAKIMPKAAKVHINDL
MDSLRAYPMRQRERITFEYLLLKDVNDSMEHADQLARLVDRRKGKINLIAYNATEGMPYD
APDRGKVEAFEKRLWDHGLTAFIRRSMGSDIEAACGQLKAENM
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaatcttattgaattgacaaaaaatgaccttgaggcgttcgttgccgaggatttg
aaagaacctcgtttccgcaccgaacagatctggcaatggctgtggcagaagcgcgtccgc
aacattgacgccatgaccaacctgtccaagccgctccgggaaaaagtcgccaccatggca
accattgcctggccggaaatcgccaaagtcgccacgagcaaggatgggaccatcaagttg
ctgttgcgcatgggtgacggtgcgctcatcgagaccgtgctcatccccatgaatgaccgt
tactcccaatgcctgtccactcaggtgggctgtgccatggcgtgtactttctgcaacacc
ggcaagctcggttttgaacgcaacctgacctatggcgaaatcatgggacagattctggta
ggccgccaatatctggaagatcagggcatgaacccgctcaagaacctcgtgttcatgggc
atgggtgagccgctgctcaacctcgagactcttatcaaggtattgaccgacctgccgtgt
gaacggggtctgtctctgtcatggcgccggtccatggtttccactgtcggcttccccgac
aaacttaaaattttgggcgaccttgaaatagctctgcctgccatttccctacatgctccc
acgcaggaattgcgcgccaagatcatgcccaaggccgccaaagtgcatatcaacgacctc
atggacagcctccgggcctatcccatgcgtcaacgcgaacggatcacctttgagtacctg
ctcttaaaagatgtgaacgattcaatggaacacgcggaccaactggcccgtctcgttgat
cgcagaaagggcaagatcaacctcatcgcgtacaacgccaccgagggtatgccctatgac
gcacccgatcgaggcaaggttgaagcctttgaaaaacgtctgtgggatcacggattgacc
gcctttatccgtcgttccatgggctcggatatcgaagcggcatgtggtcagctcaaagct
gaaaacatgtaa
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