Pseudodesulfovibrio nedwellii: SYK_23950
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Entry
SYK_23950 CDS
T09024
Name
(GenBank) hypothetical protein
KO
K00558
DNA (cytosine-5)-methyltransferase 1 [EC:
2.1.1.37
]
Organism
pnw
Pseudodesulfovibrio nedwellii
Pathway
pnw00270
Cysteine and methionine metabolism
pnw01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pnw00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
SYK_23950
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pnw03000
]
SYK_23950
03032 DNA replication proteins [BR:
pnw03032
]
SYK_23950
03036 Chromosome and associated proteins [BR:
pnw03036
]
SYK_23950
09183 Protein families: signaling and cellular processes
02048 Prokaryotic defense system [BR:
pnw02048
]
SYK_23950
Enzymes [BR:
pnw01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.37 DNA (cytosine-5-)-methyltransferase
SYK_23950
Transcription factors [BR:
pnw03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
SYK_23950
DNA replication proteins [BR:
pnw03032
]
Eukaryotic type
DNA Replication Termination Factors
DNA methylation enzymes
SYK_23950
Chromosome and associated proteins [BR:
pnw03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
SYK_23950
Prokaryotic defense system [BR:
pnw02048
]
Restriction and modification system (R-M system)
Type II R-M system
DNA methyltransferases
SYK_23950
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_methylase
Methyltransf_15
Motif
Other DBs
NCBI-ProteinID:
BDQ38035
LinkDB
All DBs
Position
2596041..2597501
Genome browser
AA seq
486 aa
AA seq
DB search
MSEWVNKKITKAKKRGYYRTVDLFAGCGGMSLGFDRAGFKSVAAIELNDKARDSHVLNFS
QKVSCGYRSFSDIRTTPPEVAVEHLCVGGDSAETAVDVVVGGPPCQAFSRLGRAALWRLA
GKDYAHASDDRAAYYLDYLRYITALKPLAFVMENVREIGKFVKKNIAEEIAVTAEALGYE
TRYALLNAAWYGVPQLRERMFIVGIRKEFGVFPEFPSIERKYNLPVGYSTARAGNGHAQV
LSPCDHYVDHFKKKSRLQPAVSASEAFYDLPPITWHLDGRNGKGNKRDTSKFFDYLKRDS
TFSKKMKEWPGFRSQEQFDGNVIRYTPRDYETFKRMPHGGMYPEALETANAIFIERIAEE
EKKLGVKIKERSEKWNEVFKATVPPYKNNRYPNKFRKMWPDHPARTVPAHIGKDSYSHIH
FDNEQARCISVREAARLQSFPDAFRIAGSMNAQLTQIGNAVPPLLAWAVAKALDDRLDKG
FMNICR
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaatgggtgaataagaaaattacaaaggctaaaaagcgcggttactacaggact
gttgatctttttgctggatgtggtggcatgagtcttggttttgatcgtgctggctttaag
tctgtcgcagctattgagctaaacgataaggctagggactcacatgtgttaaatttttcc
cagaaagtgtcatgtgggtataggtccttttcggacatccgaacgaccccgccagaggtc
gccgttgaacacctttgtgtcggtggggattctgcagaaactgccgtggatgttgtcgtt
ggtgggccgccttgccaagctttttcaagacttggtcgtgctgctctttggcggttggct
ggtaaagattatgcccatgcttctgatgatcgcgcagcttactatttagactatttaagg
tatataacagcgcttaagcccttagcgtttgtgatggaaaatgtgcgagaaatcggtaaa
tttgtgaaaaagaatattgccgaggaaatagctgttaccgctgaagcattgggctatgag
actcgctatgctcttctcaatgccgcttggtacggtgtaccacagcttcgcgaacggatg
tttatagtggggattagaaaggaatttggtgtctttcctgaatttccttctattgaacga
aaatataatcttcctgtggggtattcaacagctagggcaggaaatggacacgcccaagtc
ctttccccatgtgatcattatgtggatcacttcaagaagaaatctcgattacaacctgct
gtgtccgcctctgaggctttttatgaccttcccccgattacatggcatcttgatggaagg
aacggtaaagggaataaaagggataccagtaagttctttgattacttgaaaagggactct
acattttcaaaaaaaatgaaggaatggcccggatttcgatcgcaggagcagtttgatggg
aatgtcatacgttatactccgcgtgattatgaaacatttaagcgcatgcctcatgggggg
atgtacccagaagctcttgagaccgcgaatgcaatttttattgaacgcatagctgaagaa
gagaaaaaattgggtgttaaaatcaaggagagaagtgaaaaatggaatgaagtatttaaa
gccacggtccctccgtataagaacaaccggtatcccaacaaatttaggaaaatgtggcct
gaccatcccgctagaacggttcctgcacacatagggaaggattcatattcccatatacac
tttgacaatgaacaggcgagatgcatttcggttagagaagcggcaaggcttcagtccttt
cccgatgcttttcgtattgcaggaagtatgaatgctcagttgactcaaataggcaatgcc
gttcctcctctgctggcttgggcggtagccaaggcgcttgacgatcggctggataaaggg
tttatgaatatttgtcgatga
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