Pseudodesulfovibrio nedwellii: SYK_24880
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Entry
SYK_24880 CDS
T09024
Symbol
rocD
Name
(GenBank) ornithine aminotransferase
KO
K00819
ornithine--oxo-acid transaminase [EC:
2.6.1.13
]
Organism
pnw
Pseudodesulfovibrio nedwellii
Pathway
pnw00330
Arginine and proline metabolism
pnw01100
Metabolic pathways
pnw01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
pnw00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
SYK_24880 (rocD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pnw01007
]
SYK_24880 (rocD)
Enzymes [BR:
pnw01000
]
2. Transferases
2.6 Transferring nitrogenous groups
2.6.1 Transaminases
2.6.1.13 ornithine aminotransferase
SYK_24880 (rocD)
Amino acid related enzymes [BR:
pnw01007
]
Aminotransferase (transaminase)
Class III
SYK_24880 (rocD)
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GFIT
Motif
Pfam:
Aminotran_3
Aminotran_1_2
Cys_Met_Meta_PP
Motif
Other DBs
NCBI-ProteinID:
BDQ38128
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Position
2706678..2707877
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AA seq
399 aa
AA seq
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MKSDQYILLEDEFGAQNYKPLDVVIERGEGIWVWDVDGNKYMDCLSAYSAVNQGHCNPKI
MGAMFEQAKKLTLTSRAFRNDQLGPLYKELCDLTNSHKVLPMNSGAEAVETAIKAVRKWG
YQVKGVPENKAEIIVCRNNFHGRTITIISFSTDPISTTGFGPFTPGFKVVDFGDAAAFEA
AINDNTVAFLVEPIQGEAGVIIPPDGYLKDIRRICDEKSIVLIFDEIQTGLGRTGALLAE
EHEGVEADLTLIGKALSGGFYPVSAVLSNTEVLGVLKPGEHGSTFGGNPLACAVARAALK
VLVEDNLIENAQRMGEYFMEGLRKIKNSKIKEVRGRGLLIGVEFHDNAGGARQYCEKLKE
VGLLCKETHETIIRFAPPLVITKADINWALERIVPILSQ
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atgaagtcggatcaatacattttgcttgaagatgagtttggcgcgcagaattacaagccg
cttgatgtggtcattgaacggggcgaaggtatctgggtctgggacgtggacggtaacaag
tacatggattgtctttctgcctattctgctgtgaatcaaggccattgcaatcccaagatt
atgggcgccatgtttgagcaggccaaaaaactcactttgacttcccgtgcttttcgcaat
gaccagctcggtcctctctataaagagctgtgtgatttgaccaattcccacaaggtactt
cccatgaattctggagcggaagccgttgagacagccatcaaagccgttcgcaagtggggt
tatcaggttaagggagttcccgaaaataaggcagaaattattgtttgtcggaataatttt
cacgggaggaccatcaccatcatttccttttctaccgacccgatttccaccacgggattc
ggcccgttcacgccgggtttcaaggttgtcgattttggagatgccgccgcatttgaagct
gccatcaacgacaacactgtggcctttcttgtggaacccattcagggcgaggctggagtc
atcatcccacctgacgggtatcttaaggatattcgtcgtatctgcgatgaaaaaagcatc
gttctcattttcgacgagattcagactggtctcggccgtaccggtgcgcttctggccgaa
gagcatgaaggtgtcgaagcagatcttactcttataggcaaagccctttctggtggattt
tatccggtttcagcggtgctttccaataccgaagtgctcggtgtgctcaagcccggcgag
catggttccacctttggcggcaatccgctcgcttgtgccgtagcccgggctgcactcaag
gtgctcgtcgaagacaatctcatcgagaacgcccagagaatgggtgagtatttcatggaa
gggctgcgtaaaatcaagaattccaagattaaggaagtgcgtgggcgcggtctgctcatt
ggtgttgaatttcatgacaacgcaggtggtgcgcgccaatattgcgaaaagcttaaggaa
gtcggattactctgcaaggagacccacgaaaccattattcggttcgctccgccgcttgtt
attactaaagccgacatcaattgggctcttgaaagaatcgtgcccattttgagtcaataa
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