Pseudodesulfovibrio nedwellii: SYK_27530
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Entry
SYK_27530 CDS
T09024
Symbol
cysS
Name
(GenBank) cysteine--tRNA ligase
KO
K01883
cysteinyl-tRNA synthetase [EC:
6.1.1.16
]
Organism
pnw
Pseudodesulfovibrio nedwellii
Pathway
pnw00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
pnw00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
SYK_27530 (cysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pnw01007
]
SYK_27530 (cysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pnw03016
]
SYK_27530 (cysS)
Enzymes [BR:
pnw01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.16 cysteine---tRNA ligase
SYK_27530 (cysS)
Amino acid related enzymes [BR:
pnw01007
]
Aminoacyl-tRNA synthetase
Class I (G)
SYK_27530 (cysS)
Transfer RNA biogenesis [BR:
pnw03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
SYK_27530 (cysS)
Prokaryotic type
SYK_27530 (cysS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1e
tRNA-synt_1g
DALR_2
CysS_C
tRNA-synt_1
tRNA-synt_1f
CHASE3
Ku_C
Motif
Other DBs
NCBI-ProteinID:
BDQ38393
UniProt:
A0ABM8B3L1
LinkDB
All DBs
Position
complement(2989583..2991040)
Genome browser
AA seq
485 aa
AA seq
DB search
MRLYNTLKRQKEEFTPANGNDVNMYVCGITAYDLCHIGHARSSVVFDVLYRYLQRKGYNV
NFIRNFTDIDDKIIKRANEVGKEAGEIAEKFIGEFYVDMDKLSVLRPDVEPKCTEHIPEM
IALTERLINKGHAYSTPSGDVYFKVRSFEGYGKLSGRNIDELESGARIDPGEEKQDPLDF
ALWKGAKPGEPSWESPWGQGRPGWHLECSAMSEKYSSLPLDIHGGGQDLSFPHHENEVAQ
SEADTGKPFANYWVHNGFVQINSEKMSKSLGNFFTIRDILDKFLAETLRYFLLTMHYRSP
LDFSFEALEEAEKGIKRIYSALAQMDVELAKSKWKKSPFPEELVTELTEIEKHFDEAMED
DMNTAGALGHVFSAIRLAGRVAEDKNLRKSEGGRDLFTRIKKNVAHWGEVLGIFEREPVE
FLTELRDNRAARTDIDPVKVQGLLDARQQARKDKDFEKSDAIRDELAEMNVEVKDTPQGA
TWDVQ
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atgagactttacaatacgctcaaacgacagaaagaagaattcaccccggcgaacggcaat
gacgtcaatatgtacgtctgcggcatcacggcatacgatctctgtcacatcggccatgct
cgctccagcgtggttttcgacgtcttgtaccgatatctccagcgcaaaggttacaacgtc
aacttcatccgcaatttcacggacattgatgacaagatcatcaagcgcgccaatgaagtc
ggaaaggaagctggcgaaatcgccgaaaaattcatcggtgaattctatgtggacatggac
aaactatccgtacttcgtccagatgtggaacccaagtgtaccgaacacatccctgaaatg
atcgccctgaccgaacgtctcatcaacaaaggacacgcttactccaccccatccggtgac
gtctatttcaaggtccgttcctttgaaggatacggcaaactgtcaggccgcaacatcgac
gagttggaatccggtgcacgcatcgaccccggtgaagaaaagcaggacccgctcgatttc
gcactgtggaaaggagcaaaacccggcgaaccttcctgggaatccccttggggccaaggc
cgtcccggctggcatttggaatgttcggcaatgtccgaaaaatactcttccctgccgctg
gatattcacggcggtggacaggatctttccttcccgcaccacgaaaacgaagtagcacag
tctgaggctgacacgggcaaaccgttcgccaactactgggtgcacaacggattcgtacag
atcaactccgagaagatgtccaagtcccttggcaacttcttcaccatccgggacattctg
gacaaattccttgccgagacactgcggtactttctgctgaccatgcactatcgcagccca
ctcgacttttctttcgaggccctcgaagaagcagaaaaaggcatcaaacgcatctactcc
gctttggcccagatggacgttgaactggccaaatccaaatggaaaaaatctccgttccct
gaagaactggttactgaattgaccgagatcgaaaagcatttcgacgaagcaatggaagac
gacatgaacacggctggtgcgttaggacatgtcttctccgccattcgtctggccggacgc
gttgcagaggacaagaacctgcgcaaatccgaaggtggtcgcgatctgttcacccgcatc
aaaaaaaacgttgcccattggggcgaggtactcggtatcttcgaacgcgaacctgtcgag
tttctgaccgagttgcgagataaccgcgccgcccggaccgatatagatccggtcaaggtt
caagggcttttagacgcccgtcagcaggcacgtaaagacaaggatttcgagaagtccgat
gccattcgtgatgaactggctgaaatgaacgttgaggttaaagacacgccgcagggcgct
acttgggacgtgcagtaa
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