KEGG   Pseudodesulfovibrio nedwellii: SYK_28140
Entry
SYK_28140         CDS       T09024                                 
Symbol
gspD
Name
(GenBank) type II secretion system protein GspD
  KO
K02453  general secretion pathway protein D
Organism
pnw  Pseudodesulfovibrio nedwellii
Pathway
pnw03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:pnw00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    SYK_28140 (gspD)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:pnw02044]
    SYK_28140 (gspD)
Secretion system [BR:pnw02044]
 Type II secretion system
  General secretion pathway protein
   SYK_28140 (gspD)
SSDB
Motif
Pfam: Secretin Secretin_N type_II_gspD_N0 KH_SLS1_1
Other DBs
NCBI-ProteinID: BDQ38454
LinkDB
Position
3065484..3067487
AA seq 667 aa
MRMIRLFLLVFLALWLAAAPVMAAQKAKIAPQRTISMDFKNVDLHILIKFISELTGRNFI
VDKRVAGRVTAYSPSKLSIEEAYKAFESIMVVNNFAIVATKIENEYKIVPMVEARRLGIP
VQAGRSVRSDSGEELITQIIPLKNSSAPELSKLLVNMTDKNGLVSVYNPTNTLIITAPAA
NIEALLSIIKEVDKGSYASQMETFPLVHGDAKTIAGSISKIMTSKIQEMEKVGKKAMALV
EADVRTNSVVALGDPASLDTISDMISALDIPTPVGKDDIHFMSLENADAEDVAKILNELI
SRQTDKDGKKTKLSKDIKVVADKATNSLIITARPDEFATLEGTIKQLDILRKQVYIEALI
MEVSVDSSFSFGVNWAVGGSGGDTSVFGSTNTGGGSITVPSATSAAPVLTFPDGGTIGTI
LSNAVNIGGTAYSIQSIINLAETNNDYKILATPQLMTLDNEKASVNVVDNIPFSKQTQTS
NVNSDYASQSLDYKDVGVKLEITPHIGERGTLRLEVKQEISRVINSLVALSSTQNVIAPT
TKKREVETVIQMQDNQTVVIAGLINDDNTNNKAQVPGLGDMPLFGWLFKQKEEKSSATNL
FIFITPRIIDTYDESSALARLKKRTIYDAELGADGQGLPKMVMSDPLNPIFIFPEKKGAL
SEKDLEQ
NT seq 2004 nt   +upstreamnt  +downstreamnt
atgcgaatgatacgtttgttcttgttggtattcttggctctctggcttgctgccgctcct
gtaatggcagcacagaaggctaagattgctcctcaacgtactattagcatggattttaag
aacgttgatcttcatatcctgatcaagtttataagcgaactaaccggacgaaatttcatt
gtggataaaagggtcgccgggcgagttacagcctattctccctccaagttatccattgaa
gaagcatacaaggcatttgaatcaattatggtggtcaataactttgccattgtcgctacc
aagatagagaacgaatataaaattgttcctatggtcgaggcaaggcggttggggattccc
gttcaggccggtcgatcagtcaggtctgactctggtgaagaactaatcactcagatcatt
cctctcaagaattccagtgccccggagttgtccaagttgctggttaatatgaccgataag
aatggtttggtgagtgtttataatcccacaaatacgctgattattaccgcaccagctgct
aatatcgaggccctcctgtctatcatcaaggaagtagataaggggtcatacgcctcacaa
atggagacctttccgcttgttcatggtgatgccaaaacaatcgctggcagcatctcgaag
atcatgacttctaagattcaggagatggagaaggtgggcaagaaagccatggctcttgtg
gaggcggatgttcggacgaactctgtggtcgccttgggtgaccccgccagcctggatacc
atttcagatatgatttcagctttggatatcccgacacccgttggtaaggacgatattcat
ttcatgagtcttgaaaatgccgatgctgaagatgttgccaagattctcaacgaattgatt
tcgcgtcagaccgacaaagatggtaagaagactaagctctccaaggatattaaggtggtg
gctgacaaggcaactaacagtttgattattactgcccgtcctgatgaatttgccacgctg
gaggggacgattaagcagctcgatatactcaggaagcaggtgtatattgaagcgttgatt
atggaagtgtcggtagactcaagcttttcttttggggttaattgggctgtgggtggttct
gggggtgatacctcggtatttggatctacgaatacgggcggcggttctattactgttcca
agtgcaacttctgcggctcctgtgctgacttttcccgatggcggaacaataggaacaata
cttagtaatgcagttaatatcggtgggacagcatatagcatccagtctatcattaatctt
gctgagacaaataatgattacaagatattggcaacgcctcagttaatgacccttgataat
gagaaggctagtgttaatgttgtagataatattccgttttcaaagcaaacacagacttca
aatgtcaactcagactatgcttcacaaagtttggattataaagatgttggtgttaagcta
gagattacgcctcatattggagaacgtggaacgctgcgtctcgaggttaagcaggaaata
agtcgggttattaatagccttgttgccttgtcttctactcaaaatgttattgctccgaca
actaagaagcgggaagttgagacggtcattcagatgcaggataaccagaccgtagtcatt
gctggtttgatcaatgatgataatacaaacaataaagcccaagtccccggcttgggagat
atgcctttgttcggatggttgtttaagcagaaggaagaaaagagctctgcaacgaatttg
tttatatttattactcctcggattattgatacttatgatgagtcctctgctttagcccga
ttgaaaaaaagaacgatttatgatgccgaattgggagctgatggccagggacttcccaag
atggttatgtccgatccgttgaacccaatatttattttcccagagaagaaaggcgcgttg
tctgaaaaggatttggagcagtaa

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