Pseudodesulfovibrio nedwellii: SYK_28540
Help
Entry
SYK_28540 CDS
T09024
Symbol
fadD
Name
(GenBank) long-chain-fatty-acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
pnw
Pseudodesulfovibrio nedwellii
Pathway
pnw00061
Fatty acid biosynthesis
pnw00071
Fatty acid degradation
pnw01100
Metabolic pathways
pnw01212
Fatty acid metabolism
pnw02024
Quorum sensing
pnw04146
Peroxisome
Module
pnw_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
pnw00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
SYK_28540 (fadD)
00071 Fatty acid degradation
SYK_28540 (fadD)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
SYK_28540 (fadD)
09145 Cellular community - prokaryotes
02024 Quorum sensing
SYK_28540 (fadD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
pnw01004
]
SYK_28540 (fadD)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pnw04147
]
SYK_28540 (fadD)
Enzymes [BR:
pnw01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
SYK_28540 (fadD)
Lipid biosynthesis proteins [BR:
pnw01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
SYK_28540 (fadD)
Exosome [BR:
pnw04147
]
Exosomal proteins
Exosomal proteins of breast milk
SYK_28540 (fadD)
Exosomal proteins of breast cancer cells
SYK_28540 (fadD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
BDQ38494
LinkDB
All DBs
Position
complement(3110436..3112175)
Genome browser
AA seq
579 aa
AA seq
DB search
MEHINRPWLKAYDPDVPPTLDYDKIPLFGFLDRAAHKWPKRKAIVFKNWSITYAKLKTQS
EIFAANLKTAGIRKGDRVALMLPNLPQTIIAFWGVLRAGAVGVMTNPLYMETEIVHQFND
ADVRCCITLDMLWPKLDKLRDSIPVEKFFITTIGEGLKFPLSTLYKLQAKKNGTAPKVPY
DGKQIFSFKELTKGREKFTDKKVDHHDTALLQYTGGTTGVAKGCILTHSNISANMQQCHA
MMHTLGKKKETFLGILPYFHIYGLTTCLAWPTSLGATLAPFPRYVPLDVLKGINKLKPTV
FPGAPSLYISLLQQKDIDKYDLKSIEVCVSGSAPMPVEYMEQFKKRSGTSITEGYGLTEA
SPVTHFNPLEGISKVGSIGLPFPDTDAKIVDMDVGGEPLPPGKRGELVVRGPQIMKGYYN
RPDATADVLRNGWLYTGDIATMDEEGYFYIVDRKKDLIISGGYNIYPREIDEVLHSHPMI
KEAVSVGIPHETRGEIVKAYVITQPGEELSRSDVIAYCREKLANYKVPRKVEFRKDLPKT
MVGKVLRRALRDEETAKVEAKKAQKALKKAKKAEDHAGE
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atggagcatataaaccgcccctggctcaaggcgtacgaccctgacgtgccgcccacgctt
gactatgacaagatccccctgttcggctttctggacagggccgcgcacaaatggcccaaa
cgtaaggctattgttttcaagaactggtcgataacatacgccaaacttaaaactcagagc
gaaattttcgcggccaatctcaaaacggccgggatacgtaaaggagaccgggtcgccctg
atgctccccaacctgccgcagacgatcattgccttttggggtgtgcttcgcgcgggggcc
gttggagtcatgaccaatccgctctatatggaaacagagatagtccaccaattcaacgac
gcagacgtacgatgctgcatcactctagacatgctttggcccaaactggacaaactacgg
gactccatcccggtagaaaaatttttcatcaccaccataggtgaaggcttgaagttcccc
ttaagcactctttacaaacttcaagccaaaaaaaacggcaccgcgcccaaagttccctat
gacggaaagcagattttttccttcaaggagttaacgaaaggccgtgaaaaattcaccgac
aagaaagtagaccatcacgacaccgcccttctgcaatacacaggcggaaccacaggagtg
gcaaaaggatgcatcctgacccattccaacatcagcgcgaacatgcaacaatgccatgcc
atgatgcacaccttggggaaaaaaaaggaaacattcctcggaatcctcccctattttcat
atatatggactgacgacctgtcttgcctggccgaccagtctgggggcaacactggctccg
tttccgcgctatgttcctcttgacgtactcaaaggaatcaacaagctcaaaccgaccgta
ttccccggtgcaccgtcactgtatatttccctacttcagcaaaaagacatcgacaaatac
gatctaaagtccattgaagtgtgtgtttccggctctgcccccatgcctgtcgaatacatg
gaacaattcaaaaaaaggtctggcacatccattaccgaggggtatgggttgacggaggcg
tcacccgtcacccatttcaacccgctagaaggtatcagcaaagtcggctctattgggctg
cctttccctgatactgacgccaagatcgtcgacatggatgtcggcggagaacctttgcct
ccagggaaacgaggagaactggttgtccgtggcccgcaaataatgaaaggctactataat
cgcccggacgccacggccgacgtcctacgaaatggctggctctacaccggcgatatcgcc
accatggatgaagagggatacttctacatagtggatcgcaaaaaagatctaatcatttca
ggtggttataacatatatccgcgcgaaatagatgaagtcctgcactcccaccccatgatc
aaggaagctgtctccgttggaattccccacgaaacacgcggcgaaatcgtcaaagcctat
gtaatcacccagcccggagaagaactctcccgcagcgatgtcatagcttactgtcgagaa
aagcttgccaattacaaagtccctcgcaaagtcgaattcagaaaagacctgcccaaaacc
atggtcggcaaagtcctccgccgagccctgcgcgatgaagaaacggccaaagtcgaagcg
aaaaaagcccaaaaggctctcaaaaaagcaaaaaaagcagaagatcatgccggagaataa
DBGET
integrated database retrieval system
