Pseudodesulfovibrio nedwellii: SYK_28750
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Entry
SYK_28750 CDS
T09024
Symbol
rluC
Name
(GenBank) pseudouridine synthase
KO
K06179
23S rRNA pseudouridine955/2504/2580 synthase [EC:
5.4.99.24
]
Organism
pnw
Pseudodesulfovibrio nedwellii
Brite
KEGG Orthology (KO) [BR:
pnw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pnw03009
]
SYK_28750 (rluC)
Enzymes [BR:
pnw01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.24 23S rRNA pseudouridine955/2504/2580 synthase
SYK_28750 (rluC)
Ribosome biogenesis [BR:
pnw03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
SYK_28750 (rluC)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
BDQ38515
UniProt:
A0ABM8B4C6
LinkDB
All DBs
Position
complement(3130045..3130947)
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AA seq
300 aa
AA seq
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MPKAQFITVSDAESGQKLLQLLERRLTGDVPRSAIQKWIRKGQVRVDKGRKKPFDRITAG
QIVRIPPYTPGESKATVSAGNLVTAYEDDDYMAIAKPAGLAAHGGDKITDSVTARLRSIH
SDAEFMPTLAHRLDRDTSGLLLAAKSYEALRTLNDLFASGDVGKLYLAWVEGEWKERETI
LLEDRMGKKGVPGQEKVRTGKGKTALAKVTGLVSGRRQSLVAVRLITGRTHQIRVQLASR
KHPVCGDHKYGKSRDRTAMRLHCYAMQIMEKTITLEPLWSGKWEVPSDALREALSLLYDD
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atgcctaaagcacaattcattaccgtttccgatgccgagtcaggccaaaagctgctccaa
ctccttgaacgacgactgactggagatgttccgcgttcagctattcagaaatggatacgc
aaaggacaggtgcgcgtggacaaagggcgcaaaaaaccctttgaccgcatcactgcaggg
cagatcgtccgaatcccgccgtacactcccggcgaatccaaagccactgtctcagccggc
aaccttgttacggcctacgaagacgacgattacatggccattgccaaaccagcaggactg
gcagctcacggcggagacaagatcaccgactcggtcacagctcgactccgctccatccat
tcggacgcagagttcatgccgacactggcgcatcggctggaccgagacacttccggcctt
ttgctcgcagcgaagagctatgaggctctgcgcacactcaatgacctgtttgcatcaggc
gatgtcggcaaactctaccttgcatgggtggaaggcgaatggaaggaacgagagacaata
ctccttgaagaccgtatgggaaaaaaaggagtgccggggcaggaaaaagtccgcacaggc
aaaggtaaaaccgccctcgccaaagtgacaggtctggtttccggacgtcggcaaagcctc
gtggcggtacgattaatcactggacgcacccatcaaattcgggtgcagttggcatcacgt
aaacacccggtctgtggagatcataaatacggaaaatccagagaccgcacagccatgcgc
ctgcattgttacgccatgcaaatcatggaaaaaaccatcactcttgaaccgctttggtcc
ggcaaatgggaagtgccgtccgatgcgctccgggaggctttatctcttttgtacgatgat
taa
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