Pseudodesulfovibrio nedwellii: SYK_28970
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Entry
SYK_28970 CDS
T09024
Name
(GenBank) hypothetical protein
KO
K01999
branched-chain amino acid transport system substrate-binding protein
Organism
pnw
Pseudodesulfovibrio nedwellii
Pathway
pnw02010
ABC transporters
pnw02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pnw00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
SYK_28970
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
SYK_28970
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pnw02000
]
SYK_28970
Transporters [BR:
pnw02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Branched-chain amino acid transporter
SYK_28970
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_6
ANF_receptor
Peripla_BP_5
Motif
Other DBs
NCBI-ProteinID:
BDQ38537
LinkDB
All DBs
Position
complement(3157810..3158919)
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AA seq
369 aa
AA seq
DB search
MNRSMIFICTILLAAFFGLNITGCSQPESLRIGTILILTDQNGERLSVEVEMLNGMQMAI
KEINEEGGILGTKIELIHKDCQGDPELAKKQFREIAAQSPAAVITIYTHITAALVPLATE
LKTIQLATMATGEGITDNAPYSFRYWPQSSDEGRAILPLVDKLRVRKLGLINIDNAYGNS
VSNELSRLLTTKEVTTQKIVYNKINPSLHERLKAFVDCDAISFTCFPSDIEPLAKAIREE
YPNMPLIGPNSISSSHYLKNPIFDGIYVAAPLVYNPASPYLGNVGTRFEETYGLPLSQYS
AIGYDIITLLTQIIGKNGASPDAIKNTFEAGFVFPGLFGDVVNAQGSHHMTYQLIPAKIK
NQKLKYQRR
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atgaatcggtccatgatatttatatgtacaatactactggccgcattcttcggcctgaat
atcacaggatgttcgcaacccgaatctctccgaattggtaccattttgatcctgacagat
caaaatggcgaacggctttcagtagaagtagaaatgctcaacggcatgcagatggcaatt
aaagaaatcaatgaagaagggggtatcctcggtacaaaaattgaattgatacataaagat
tgccaaggggacccggaactggccaaaaaacaatttcgagaaatcgctgcgcaatctccc
gctgctgtcatcaccatatacactcatataaccgcagcccttgttcctctcgccacagaa
ttaaaaaccattcaattagcaaccatggcaacaggcgaaggcatcacggacaatgcaccg
tactcattcagatattggcctcaatcttcggatgaaggccgggccattttacctctggtc
gataaactcagggtccgaaaactcggactaatcaacatcgacaatgcatatggaaactct
gtttcaaacgaactctcaaggctgctgaccacaaaagaagtgacaacacaaaagattgtc
tacaacaaaataaatccttcattacacgaacggcttaaagcctttgtcgactgcgacgcc
atcagtttcacgtgcttcccaagtgatattgaaccgttggccaaggccatacgtgaagag
taccccaatatgccccttatcggtccaaacagtatttcaagctctcactatctcaaaaat
cccatttttgacgggatctatgttgcagcgccactcgtctataacccagcctctccctac
ctcggaaatgttggaacaagatttgaagaaacatacggactccctctgagccaatactct
gccatcggctacgatattatcacattgctcacacagattatcggcaaaaatggagcgtct
cctgacgccatcaagaacacctttgaagcgggatttgttttccctggactcttcggtgat
gtggtcaatgcccaagggtcgcatcatatgacgtaccagctcatcccagcaaaaataaaa
aatcaaaagctgaaataccaaaggcgttag
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