Pseudodesulfovibrio nedwellii: SYK_29480
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Entry
SYK_29480 CDS
T09024
Name
(GenBank) C4-dicarboxylate ABC transporter substrate-binding protein
KO
K11688
TRAP-type transport system periplasmic protein
Organism
pnw
Pseudodesulfovibrio nedwellii
Pathway
pnw02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pnw00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
SYK_29480
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pnw02000
]
SYK_29480
Transporters [BR:
pnw02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
SYK_29480
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DctP
Motif
Other DBs
NCBI-ProteinID:
BDQ38588
LinkDB
All DBs
Position
complement(3220129..3221127)
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AA seq
332 aa
AA seq
DB search
MKKLLTTFMAVAVLCVALPTIGQAETKLTYSNFFPTTNHQSKLAEAWCLEVEKRTNGKVV
IEYYPGGTLTKAKQCYDGVVEGMSDVGLSCLAYSRGRFPVMAAVDLPLGYTSAAQATATA
NAVYKKFNPAELSDVEVMYFNGHGPGLLFTVQKPVKTLADIKGEKIRATGNSAKLVKALG
GTPVAKPMPENYQLLQKGVVDGSMHPIESNKSFKLGEVCKYGTDSFSVAYTTVFFIVMNK
DKWTAIDTESQQIIRKINEEWAVKHATAWDEADAAGRQFFMDKGGEIMELSVEESEAWVI
AAKPVLDGYVAETTKKGLDGKTILEFTQSTLK
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaactgctgacaacattcatggccgtagctgtgctgtgcgttgccctgccgacc
ataggtcaggccgaaacaaagttgacctactccaatttcttcccgaccactaaccatcaa
tcgaaactggctgaagcgtggtgtctggaagtggagaaaaggaccaacggcaaagtggtt
atcgaatattaccccggcggcaccctgaccaaagccaaacaatgctacgatggcgtcgtg
gaaggcatgtccgatgtcgggttatcctgtctcgcctactcacgcggtcgcttcccggtc
atggcagccgttgatcttcctctgggatacacctccgcagcacaggccactgccacggcc
aatgctgtctataagaaattcaacccagccgaactcagtgacgtggaagtcatgtacttc
aacggccacggccccggtctgctgttcacggtccaaaaaccagtcaaaacactggccgac
atcaagggcgaaaagattcgcgccaccggcaactccgccaagctggtcaaggctctgggc
ggtacgcctgtggctaaacccatgcccgaaaactaccaactcctgcaaaaaggcgttgtt
gacggaagcatgcaccccatcgagtccaataaatctttcaagctcggcgaagtctgcaag
tacggcacggactcattcagcgtggcctacaccacagtgttcttcattgttatgaacaaa
gacaagtggacggccattgataccgaatcccagcagatcattcgcaaaatcaacgaggaa
tgggcggtcaagcacgcgacagcttgggatgaagcagacgcagccggacgccagttcttc
atggataagggtggcgaaatcatggagctatccgtcgaagaatccgaggcatgggtcata
gcagccaagcctgttctcgacggctatgtcgccgaaacaacgaagaaaggtcttgatggc
aagaccatcctggaatttacccaatcaacactgaaatag
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