Pseudodesulfovibrio nedwellii: SYK_29550
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Entry
SYK_29550 CDS
T09024
Symbol
lytS
Name
(GenBank) transcriptional regulator
KO
K07704
two-component system, LytTR family, sensor histidine kinase LytS [EC:
2.7.13.3
]
Organism
pnw
Pseudodesulfovibrio nedwellii
Pathway
pnw02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pnw00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
SYK_29550 (lytS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
pnw01001
]
SYK_29550 (lytS)
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
pnw02022
]
SYK_29550 (lytS)
Enzymes [BR:
pnw01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.13 Protein-histidine kinases
2.7.13.3 histidine kinase
SYK_29550 (lytS)
Protein kinases [BR:
pnw01001
]
Histidine kinases
LytTR family [OT]
SYK_29550 (lytS)
Two-component system [BR:
pnw02022
]
LytTR family
LysS-LysR
SYK_29550 (lytS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
5TM-5TMR_LYT
His_kinase
HATPase_c
GAF_3
GAF_2
GAF
HATPase_c_2
Peptidase_C7
ECF_trnsprt
Motif
Other DBs
NCBI-ProteinID:
BDQ38595
UniProt:
A0ABM8B444
LinkDB
All DBs
Position
complement(3226764..3228482)
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AA seq
572 aa
AA seq
DB search
MFEHILDLLVTLIGRFGAMMAIGLFVLTLSPLGKLGVNRRPEKKYRILLAVLFGMLGIMG
TYSGDIVFDSYANLRGVYVITGGLLGGPLVGFGAGLIAGGHRLLIDIGGFSSLPCGLATF
LEGIIAGYVSIHLKGNNLNWRAALFVGLGGETMHQLMVLTMAKPFDQAVDLVKVIALPMI
AVNTFGAVLFVQTLHLLFEYRSKRDSSRISQIMAIANKTVAHLRSGLDEASALETARIIW
ERVPVAAVDIASNTKVLTHLGIGDDHHLPGEPLRTTATKKVLLSGKPAFLRSKEAIGCDD
PNCPLTSAVIVPMRKGNRIVGCLKFYGTDGIPLHTTHFELAKGLAGLFSTQLELQDIQTK
NQLLAKAEIRRLQTQINPHFLFNALNTIGAFCRTKPERARSLLSELAMYMRRNLDAGDGF
APIGSELEQVRSYLEIEQARFGDRVKSEWNLDDGVENIEVPTLIIQPLVENSVKHGILGR
DDGGTIRIRIGRDNNLVHVHIEDDGVGMNEATLWSVLNSENEFSGEDHIGVRNCNQRLEQ
IYGPSHMLSIISHPGKGTRVSFTIPHVETAPA
NT seq
1719 nt
NT seq
+upstream
nt +downstream
nt
atgtttgaacacattctcgatcttctggtcacactgattggccgattcggtgccatgatg
gccatcggcctgttcgtgctgacgctgtctccgctgggcaaactcggcgtaaatcgccgc
cctgaaaagaaatacagaatcttgttagctgtgctgtttggcatgcttggcatcatgggc
acctacagcggcgacattgtctttgattcgtacgccaacttgcgcggtgtctatgtcatc
actggcggactgctcggcggcccccttgtaggctttggagcaggtcttatcgctggcggc
catcgattgcttatcgatatcggcgggttcagctccctcccctgtgggctggcgaccttc
cttgaaggtatcatagctggctatgtttccattcacctcaagggtaacaatctcaactgg
cgagccgcactctttgttggtttggggggtgaaaccatgcaccagttgatggttttgacc
atggccaaaccttttgatcaagccgtagatctggtcaaagtcatcgcattgccaatgatc
gcggtgaacacgttcggcgcggtgttgttcgtgcagaccctgcacctgctttttgaatac
cggagcaaacgcgattccagccgcatcagtcagattatggccatcgccaacaagaccgtg
gcccaccttcgatccggtctggatgaagcctctgcactggaaaccgcccgaatcatctgg
gaacgcgtccctgtcgccgccgttgacatcgccagcaacaccaaagtcctgacgcatctg
ggaattggcgacgaccaccatctccccggcgaacctttacgaaccacagccaccaagaaa
gtcctcctgtcaggaaaaccagcctttcttcgttccaaagaggccattggatgtgatgat
ccgaactgtccgcttacatcggccgtcatcgtccccatgcgtaaaggcaaccgcatcgta
gggtgtcttaaattctacggaaccgacggtatcccgttgcacaccacccattttgaactg
gctaaaggccttgcaggactcttctcaacacagcttgaattacaggatatccagacaaaa
aatcaattgctcgccaaagcggaaattcgacgtttgcagacccagatcaacccgcatttc
ctgttcaatgccctgaatactatcggcgcattctgtcgtaccaaaccggaacgggcacgc
tcgctcctatccgaactggcaatgtatatgcgccgcaatctcgatgcgggagacggcttc
gcgcccatcggttcagaactggaacaggtccgttcctatctggaaatcgaacaggcccga
ttcggtgaccgagtaaaaagtgaatggaatctggacgacggcgtggaaaacatcgaagtt
ccgaccctgattatccaacctctggtagaaaacagcgtcaaacacggcattctgggccgc
gatgacggcgggaccattcgcatccgcatcggacgggacaacaatttggtacatgtccac
atcgaagatgacggtgtcggcatgaacgaagccacgctttggagcgtcctgaacagcgaa
aacgaattctccggggaagaccacattggcgtgcgcaattgcaaccagcgactggagcag
atttacggcccgtcacatatgctctccatcattagtcatcccggcaaagggacccgcgtc
tccttcaccattcctcacgtcgagactgccccagcctga
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