Pseudodesulfovibrio nedwellii: SYK_30500
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Entry
SYK_30500 CDS
T09024
Name
(GenBank) D-ribose ABC transporter substrate-binding protein
KO
K10439
ribose transport system substrate-binding protein
Organism
pnw
Pseudodesulfovibrio nedwellii
Pathway
pnw02010
ABC transporters
pnw02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
pnw00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
SYK_30500
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
SYK_30500
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pnw02000
]
SYK_30500
Transporters [BR:
pnw02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Ribose transporter
SYK_30500
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
Peripla_BP_1
Peripla_BP_6
Peripla_BP_3
ANF_receptor
PucR
Motif
Other DBs
NCBI-ProteinID:
BDQ38690
UniProt:
A0ABM8B4J9
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All DBs
Position
3334220..3335095
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AA seq
291 aa
AA seq
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MKKLLTLALALVLTMALGVSAQAKDTIALVVSTLNNPFFVTLKDGAVKKANEMGYELIVL
DSQNDPSKELANVEDLTVRGVKAILINPTDSDAVSNAIRLINTAGIPVLTLDRGASHGKV
ASHIASDNVAGGKMAGDFMAEKLGKGAMVIQLEGLPGTSAARDRGAGFEQAVKANGFKVL
ASQPADFDRTKGLNVMENLLANYGDVQGVFAQNDEMALGAMRALQAAGKKVVIVGFDGTD
DGVAAVKRGDMAGTIAQQPALIGSLGVETADKVLKGQKVEANIPVPLMVVQ
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaacttttgaccctcgccttggccttggtgttgaccatggctcttggtgtctct
gctcaggcaaaggacaccatcgccctggtggtttccacgctgaacaacccatttttcgtg
accctgaaagacggtgcagtgaagaaagccaatgagatgggctacgagctgatcgttttg
gattcccagaatgacccgtccaaagagcttgccaatgtagaagatctgaccgttcgtggc
gtcaaggctattctgatcaatcccactgattccgatgctgtttccaacgccattcgtttg
atcaacactgccggtattccggtcttgacccttgatcgcggcgcttctcatggtaaagtg
gcttctcacatcgcttccgataacgtcgcaggtggtaagatggccggtgatttcatggct
gaaaagcttggcaagggtgccatggttattcagctcgaaggtctgcctggtacttccgcc
gcccgtgatcgtggtgctggtttcgaacaggctgtcaaggccaatggttttaaggttctg
gcttcccagcctgccgactttgaccgtaccaagggcttgaacgttatggaaaacctgctt
gccaactacggtgatgtgcagggtgtcttcgcccagaacgatgaaatggccctcggtgcc
atgcgtgctcttcaggccgcaggcaagaaggtcgttattgttggttttgacggcacagat
gatggcgttgccgctgtcaagcgtggcgacatggccggtaccattgcccagcagcctgct
ttgatcggttctctcggtgttgagacagccgacaaggtcctcaaaggccagaaggttgaa
gcaaatattcccgttcccctgatggttgtccaataa
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