Pseudodesulfovibrio nedwellii: SYK_30820
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Entry
SYK_30820 CDS
T09024
Symbol
hydE
Name
(GenBank) [FeFe] hydrogenase H-cluster radical SAM maturase HydE
KO
K01012
biotin synthase [EC:
2.8.1.6
]
Organism
pnw
Pseudodesulfovibrio nedwellii
Pathway
pnw00780
Biotin metabolism
pnw01100
Metabolic pathways
pnw01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
pnw00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00780 Biotin metabolism
SYK_30820 (hydE)
Enzymes [BR:
pnw01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.6 biotin synthase
SYK_30820 (hydE)
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Motif
Pfam:
Radical_SAM
BATS
Motif
Other DBs
NCBI-ProteinID:
BDQ38722
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Position
complement(3365615..3366694)
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AA seq
359 aa
AA seq
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MYTLKEHDILTYLTGANDKELFGRANATQSQEFGNGIYLRAIIEFSNVCNKKCHYCGLRA
PNKGITRYRMGNETILNAASLAVSQGAGTIVLQSGDDFSYSTQSIGTLIKEIKTQHDVAV
TLSLGDRGVDEYAFWRECGADRCLLKLETTNPRLYKRLRDGEEFSSRLHRVESLRHLGYE
VGSGVITDLPDSNLISTLQDILFLTALDLDMIAVGPFIPHPQTPLAQVAPGSIELSHRVT
AILRILNPHANIPATSALSALEPESQRLALTRGCNVIMPSMTPEDHRADYTIYPGKNASN
IDITDSLTHAKSMIRSLGLVPSSSKGFSPRRNNVQQSTPRNTTGHNPRRTKECRQVITG
NT seq
1080 nt
NT seq
+upstream
nt +downstream
nt
atgtacaccttaaaagaacacgacattctcacgtacctcacaggcgcaaatgacaaagaa
ctctttggacgcgccaacgcgactcaatcacaggagtttggtaacggaatataccttcgt
gccatcattgaattttccaacgtctgcaataagaaatgccactattgcggtctacgtgct
cccaataagggaataacccgttaccggatgggaaatgagacaatattgaacgccgcttca
ctggccgtttctcaaggagccgggaccatcgtactccagtccggcgatgatttcagctat
tccacacagtccattggtacgctgatcaaggaaatcaaaacacagcacgacgtggccgta
acgctctcattaggcgaccgaggtgtggatgaatatgcattctggcgcgagtgtggggca
gaccgttgtctgctcaaactggagaccaccaacccacgtctttataaacgactcagggat
ggcgaggagttttcgtcaagattgcatagagtcgaatccctccggcatctcggctatgaa
gttggatcaggtgttatcaccgacctccctgactcaaacctcatttccacgctccaagac
attctgttcctcactgccctcgacctggacatgatcgctgttggcccattcattccgcat
cctcaaacaccactggcacaggttgcacccggcagcattgagttatcacacagggtgacg
gccatcttacgtatcctcaatccacacgccaacatcccggctacatccgctttgagcgct
ttggaaccagagtctcaaaggcttgcactgactcgtggatgcaatgtcatcatgccctcc
atgaccccggaggaccatcgcgcagattacaccatctatcccggaaaaaacgcatcgaac
attgatatcacggattctctgacacatgccaaaagcatgatccgctccctcggccttgtg
ccgtcatcatccaaaggattctctccaaggagaaacaatgtccaacaaagcaccccgcgg
aatacgactggtcataaccctcgccggacaaaggaatgcaggcaagtcatcactggttaa
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