Pseudodesulfovibrio nedwellii: SYK_32420
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Entry
SYK_32420 CDS
T09024
Symbol
mnmE
Name
(GenBank) tRNA modification GTPase MnmE
KO
K03650
tRNA modification GTPase [EC:3.6.-.-]
Organism
pnw
Pseudodesulfovibrio nedwellii
Brite
KEGG Orthology (KO) [BR:
pnw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pnw03016
]
SYK_32420 (mnmE)
Transfer RNA biogenesis [BR:
pnw03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
SYK_32420 (mnmE)
Prokaryotic type
Methyltransferases
SYK_32420 (mnmE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MnmE_helical
TrmE_N
MMR_HSR1
FeoB_N
RsgA_GTPase
Dynamin_N
GTP_EFTU
AIG1
AAA_16
MMR_HSR1_Xtn
ABC_tran
Ploopntkinase3
Motif
Other DBs
NCBI-ProteinID:
BDQ38882
LinkDB
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Position
complement(3544592..3545983)
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AA seq
463 aa
AA seq
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MLDPRLANDTIAAIATPPGDGGVGIIRISGSQCRSVANALFRAANQRFTDFIPYHLHYGH
LLDANGNELDDVLCAFMPGPNSYTGEDIVEINCHGGRAVLSAVLDEILHKGVRLAERGEF
TYRAFMNGRMDLSQAEAVAEMIHAPTKAAMHLAQVKLSGLLGQKITDLRARLEYLRAQLC
IAVDFPDDEIECLSPEELIETSASVRTEIDELLSAVDRTKAWREGALVVLAGRVNAGKSS
LMNALLGRNRAIVTDQPGTTRDYLEESINLNGLNIRLADTAGIRQTDDAIEAAGLEKGRE
LMDQADLVLLLADGTAPLTDETMSTAATLDPQKTVLVLNKSDLDGFDTSNAAQMAAHDLE
MLAISAKKGTDIDTLCARIRDRILQGAGQPDPDELAPNARQAAVLGEAALELSELEQDTA
AGIPYDLLSVRLETACNTLSGITGEIASNDVLNSIFDAFCIGK
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgcttgatccacgactcgccaacgacaccattgccgctattgccaccccccccggagac
ggcggtgtgggcatcatccgtatcagtggcagccaatgccgaagcgttgccaatgcgcta
ttccgagccgcaaaccaacgcttcacggattttatcccctatcaccttcattatggtcac
ttgcttgatgcaaacggtaatgaactggatgacgtcttatgtgcattcatgcccggaccc
aattcatacacaggtgaagacatcgtagaaatcaactgtcatggaggtcgggccgtccta
tccgccgtgctggatgagatcctacacaaaggtgtccgccttgctgaacgcggcgagttt
acctaccgcgccttcatgaacggacgcatggacctctctcaggcagaagctgtggcagaa
atgatccacgcgcctaccaaagcagccatgcatttggctcaagtcaaactctccggcctg
cttggtcaaaaaattaccgacctccgggctcgactggaatatttgcgtgctcaactttgc
atagccgtggactttcctgacgacgaaatcgaatgtctttcccctgaagaactgatcgag
acctcagcgtctgtacgcactgaaatcgacgaacttctttctgccgtagaccgcaccaaa
gcatggcgcgaaggagcattggtcgtcttggctggtcgagtcaatgcgggcaaatcaagt
ctgatgaacgctctgctcggccgcaatcgcgctatcgtcacggaccaacccggcacaact
cgagactaccttgaagaatccatcaaccttaatgggttgaatatccgattggctgatacc
gccggcatccgacaaacggacgatgccatcgaagccgctggattggaaaaaggccgcgag
ctgatggatcaggctgacctcgttctgttgctagccgacggaacagcgccgctgaccgat
gaaaccatgtccactgcagccactcttgacccacaaaaaacggtgttggtgctcaacaaa
tctgatctggacggctttgacacaagcaacgccgcacaaatggctgcccatgaccttgaa
atgcttgccatttctgccaagaaggggacggatatcgacacgctctgcgcacgtatccgc
gaccgcattcttcaaggcgcaggtcaacccgaccccgacgagctcgcccccaatgcacgg
caggccgccgtacttggcgaagcagcccttgaattatccgaacttgaacaggatacagcg
gctggtatcccctacgaccttttgagtgtccgacttgaaaccgcctgcaacacattgtcc
ggcatcacgggtgaaatcgcatccaacgatgtcctgaactccattttcgacgcattctgc
ataggaaaataa
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