Pseudodesulfovibrio nedwellii: SYK_32620
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Entry
SYK_32620 CDS
T09024
Name
(GenBank) TrpB-like pyridoxal-phosphate dependent enzyme
KO
K06001
tryptophan synthase beta chain [EC:
4.2.1.20
]
Organism
pnw
Pseudodesulfovibrio nedwellii
Pathway
pnw00260
Glycine, serine and threonine metabolism
pnw00400
Phenylalanine, tyrosine and tryptophan biosynthesis
pnw01100
Metabolic pathways
pnw01110
Biosynthesis of secondary metabolites
pnw01230
Biosynthesis of amino acids
Module
pnw_M00023
Tryptophan biosynthesis, chorismate => tryptophan
Brite
KEGG Orthology (KO) [BR:
pnw00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
SYK_32620
00400 Phenylalanine, tyrosine and tryptophan biosynthesis
SYK_32620
Enzymes [BR:
pnw01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.20 tryptophan synthase
SYK_32620
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GFIT
Motif
Pfam:
PALP
Motif
Other DBs
NCBI-ProteinID:
BDQ38902
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Position
3565207..3566550
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AA seq
447 aa
AA seq
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MLKKIFLPQDQMPTQWYNPMPDLPTPMAPPLNPETMEPLTPDMLAPIFPDSLIAQEMSQD
RFIDIPEEVLDVYKLWRPSPLVRADRLEKAIGAKCKIYYKDESGSPAGSHKPNTAVPQAY
YNKLEGVERLATETGAGQWGTALSFACSQFDMECVVYMVKVSYEMKPYRKMLINTYGGTI
FASPSEETRTGREMLAKDPDCKGSLGLAISEAVEDAATHDNTKYALGSVLNHVLIHQTIT
GLEVKKQLEMIDEKVTHLVGCVGGGSNFGGLVLPFLPEKLAGDPVKFIPVEPKACPTLTR
GEYRYDFGDMARLTPLVKMHTLGHDFMPAPIHAGGLRYHGDAPIVCNIVEEGLTEPVAYF
QTECFEAAKLFLETEGFLPAPETSHAIKGAIEVAKTAGPDDVVVFLYSGHGMLDLASYDA
FNQGLLTNFELPQRDIEEALKACPKID
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgttgaaaaagatctttttacctcaggatcagatgccgactcaatggtataaccctatg
ccggatctgcccacccccatggctccgccacttaacccggaaaccatggaacccctcaca
cccgacatgctggccccgatttttccggattcgcttatcgctcaggaaatgagtcaggat
cggtttatcgacattcccgaagaagttttggacgtgtataagttgtggcgtccctctccg
ttggtacgggccgacaggcttgaaaaagccatcggtgccaaatgtaaaatttactacaaa
gacgagtcaggctcaccggcaggttctcataagcccaacaccgctgttccccaagcatat
tacaacaagttggagggtgttgaacgccttgccaccgagaccggcgcaggccaatggggt
acggccctgtcttttgcctgttcgcagttcgacatggaatgcgtggtttatatggtcaag
gtgagctacgaaatgaagccgtaccgtaagatgcttatcaacacttacggcggtacgatt
ttcgcttcgccttcagaagagacacgcactggccgcgagatgctggcaaaggacccggat
tgtaagggcagtctcggcctggctatttccgaggctgttgaagatgctgccactcatgac
aataccaagtacgcgcttggttccgtacttaaccacgtacttattcatcagacgatcacc
ggtttggaggtcaaaaagcagcttgaaatgatcgacgaaaaggtcacgcatctcgttggt
tgtgtgggcggcgggtccaacttcggtggattggtgcttccgttcctgcccgaaaaattg
gctggtgatccggtcaagtttattccggtagaacccaaggcatgtccgacattgactcgt
ggtgaatatcgttatgatttcggcgatatggcgcgactgactccgcttgttaaaatgcat
acgcttgggcacgacttcatgcctgcccccatccatgctggcggcttgcggtatcatggc
gatgctcccattgtttgtaatatagtggaagaagggttgactgaacctgtcgcttatttc
cagaccgaatgttttgaggcggccaagctcttcttggagactgaaggtttcttgcccgcc
ccagagacttctcacgcgatcaagggagccatcgaagtggccaagacagccggtcctgat
gatgtcgtggtctttttgtattccggtcacggcatgcttgatttggcatcctatgatgcc
ttcaatcagggattgctcaccaatttcgaattgccacagcgggatatcgaagaagctctc
aaggcctgcccgaaaattgattag
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