Pseudodesulfovibrio nedwellii: SYK_33130
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Entry
SYK_33130 CDS
T09024
Name
(GenBank) branched chain amino acid ABC transporter substrate-binding protein
KO
K01999
branched-chain amino acid transport system substrate-binding protein
Organism
pnw
Pseudodesulfovibrio nedwellii
Pathway
pnw02010
ABC transporters
pnw02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pnw00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
SYK_33130
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
SYK_33130
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pnw02000
]
SYK_33130
Transporters [BR:
pnw02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Branched-chain amino acid transporter
SYK_33130
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_6
ANF_receptor
Peripla_BP_5
DUF7349
Motif
Other DBs
NCBI-ProteinID:
BDQ38953
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All DBs
Position
3617617..3618783
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AA seq
388 aa
AA seq
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MRVKLSLIALCLVMVAMLAACSGEAEKADEKADVETGEVAPAAKLVLGVAGAHSGDLASY
GLPTVNAAKLVAAKINAAGGVNGAMVEVVAQDDQCKPELATNAATKMLSDDVKIVLGHIC
SGATKAAMPIYLDGKIVVMSPSATNPPLTQSGEYPNFFRTIAPDDAQAALEVEFAKSLGL
KNIAIIHDKGDYGKGFASFCKQFIEADADIQVALFEGVTPGAVDYSAVVQKIKGSGADGV
IFGGYHPEASKVVTGMRKKGLEVPFLSDDGVKDDTFIKVAGKYAEGVYATGPMDFSSNPL
YQEAIAAHKAEFGADPGPFFPEAYSAALALLKAVENAGSTNYDKVIEALHTKKVDTPVGN
IKFDARGDAEGVGFAIYQVQDGKYVEIK
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atgagagtcaaactgagtctgatcgctctgtgcctggtcatggtggccatgttggcagcg
tgtagcggtgaagctgagaaagctgatgaaaaagctgatgttgaaactggtgaagtggct
cctgctgcaaagctcgttctcggtgttgctggcgcccattccggtgatttggcctcctat
ggcctgcccactgttaatgcagccaagcttgttgcagccaagataaatgcagccggtggc
gtcaatggcgctatggttgaagttgttgcacaggatgatcagtgcaagcctgaattggct
accaacgcagccacgaagatgttgtccgacgacgtgaagatcgtgctcggtcacatttgt
tccggcgcgaccaaggccgctatgcccatctatcttgatggcaagatcgtggttatgtct
ccttccgcaaccaatccgccgttgacccagtctggcgaatatccgaactttttccgtacc
atcgctcctgatgacgcgcaggctgccctcgaagttgaattcgctaaaagcctcggtctc
aaaaatattgccatcattcacgacaaaggtgattatggtaagggttttgcctctttctgc
aagcagttcatcgaagctgatgctgacattcaggtcgctttgtttgaaggcgtaaccccc
ggtgctgtcgactattccgccgttgttcagaagatcaagggctccggcgctgatggtgtc
attttcggtggttaccatcccgaagcttccaaggtcgttaccggcatgcgtaagaagggc
cttgaagttcctttcctgtctgacgatggtgtgaaggacgatactttcatcaaggtcgct
ggcaaatacgctgaaggcgtgtatgctaccggtcccatggatttctcttccaatccgctc
tatcaagaagctattgccgctcataaggcagaattcggtgccgatcccggcccgttcttc
ccggaagcatactccgccgctttggctttgctcaaggctgttgagaatgcaggtagcacc
aattacgacaaggttatcgaagcccttcataccaagaaggtcgatacaccggttggtaat
atcaagttcgatgccaggggcgatgccgaaggcgttggttttgccatctaccaggtgcaa
gacggcaagtacgttgaaattaagtag
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