Pseudodesulfovibrio nedwellii: SYK_33770
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Entry
SYK_33770 CDS
T09024
Symbol
kdsB
Name
(GenBank) 3-deoxy-manno-octulosonate cytidylyltransferase
KO
K00979
3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:
2.7.7.38
]
Organism
pnw
Pseudodesulfovibrio nedwellii
Pathway
pnw00541
Biosynthesis of various nucleotide sugars
pnw01100
Metabolic pathways
pnw01250
Biosynthesis of nucleotide sugars
Module
pnw_M00063
CMP-KDO biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
pnw00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
SYK_33770 (kdsB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
pnw01005
]
SYK_33770 (kdsB)
Enzymes [BR:
pnw01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.38 3-deoxy-manno-octulosonate cytidylyltransferase
SYK_33770 (kdsB)
Lipopolysaccharide biosynthesis proteins [BR:
pnw01005
]
Lipid A
SYK_33770 (kdsB)
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GFIT
Motif
Pfam:
CTP_transf_3
NTP_transf_3
Motif
Other DBs
NCBI-ProteinID:
BDQ39017
UniProt:
A0ABN6SAA7
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Position
complement(3682469..3683209)
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AA seq
246 aa
AA seq
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MSEFPECHGIIPARYESSRFPGKPLVEIKGMPMFWHVYSRAAQCPQMTSVTLATDDARIF
EAAEKLNVPVVMTRTDHSSGTDRVLEAARKLNIDSEAVVVNIQGDEPCLEPIMLTELVTP
FTDCTVRVTTLATAIGEDEALSPDRVKVVRAKNGRALYFSRSLVPHDRDEKMHGFLLHIG
LYAFRMEALERFGSLEPSPLEQREKLEQLRLLEDGIDIYVTETRHTCHGVDRPNDLATVK
NILEND
NT seq
741 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaatttcccgaatgtcacggcataatcccggcgaggtatgaatcctcccgcttt
cccggcaaacctctggttgaaatcaaaggcatgcccatgttctggcacgtctactcccgg
gccgcacaatgtcctcaaatgacaagcgttaccctagcaactgacgatgctcgcatattc
gaggcagccgaaaaattaaacgtgccggtcgtcatgacccggaccgaccattccagcgga
acggatcgggtattggaagccgcacggaagctcaacatcgactccgaggccgtggtggtc
aatattcagggcgatgaaccgtgcctggaaccgattatgctgaccgaacttgtaactcct
ttcactgactgcaccgtccgagtgaccactctggcgacagcaataggtgaagacgaagcc
ctctcccccgatcgggtgaaggttgttcgagcaaaaaatggacgagcactctacttttct
cgctccctcgtcccccatgatcgcgatgaaaaaatgcacggattccttctccacattggg
ctgtacgcattccgcatggaggctctggagcggttcggcagtctcgaaccaagcccattg
gaacaacgtgaaaagctggagcaactccgtctgcttgaagacggtatcgatatttatgtg
actgagacaaggcacacctgccacggcgtggacaggcccaacgatctcgcaactgtgaag
aacattctggagaacgattga
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