KEGG   Pseudodesulfovibrio nedwellii: SYK_33790
Entry
SYK_33790         CDS       T09024                                 
Symbol
ddl
Name
(GenBank) D-alanine--D-alanine ligase
  KO
K01921  D-alanine-D-alanine ligase [EC:6.3.2.4]
Organism
pnw  Pseudodesulfovibrio nedwellii
Pathway
pnw00470  D-Amino acid metabolism
pnw00550  Peptidoglycan biosynthesis
pnw01100  Metabolic pathways
pnw01502  Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:pnw00001]
 09100 Metabolism
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    SYK_33790 (ddl)
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    SYK_33790 (ddl)
 09160 Human Diseases
  09175 Drug resistance: antimicrobial
   01502 Vancomycin resistance
    SYK_33790 (ddl)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:pnw01011]
    SYK_33790 (ddl)
Enzymes [BR:pnw01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.2  Acid-D-amino-acid ligases (peptide synthases)
    6.3.2.4  D-alanine---D-alanine ligase
     SYK_33790 (ddl)
Peptidoglycan biosynthesis and degradation proteins [BR:pnw01011]
 Precursor biosynthesis
  Amino acid ligase
   SYK_33790 (ddl)
SSDB
Motif
Pfam: Dala_Dala_lig_C Dala_Dala_lig_N ATP-grasp_3 ATP-grasp ATP-grasp_4 CPSase_L_D2 GARS_A ATPgrasp_ST TTL DUF1502
Other DBs
NCBI-ProteinID: BDQ39019
UniProt: A0ABM8B5R3
LinkDB
Position
complement(3684517..3685431)
AA seq 304 aa
MHVILIAGGWSDEREVSLSGAAKIRMALDELGHNVSFFDPADDFKKLLATAKQADFAFIN
LHGTPGEDGLVQAVLDKAGCPYQGAGPAASYLALNKAASKEVFEDKGIKTPDWQIVTPTQ
GREAQLKLNLPVFVKPNKGGSSLGMSLVKRIEDFPAALDKVFSMCQSALVESFIPGVELT
CGMLGDRPLPLIMIKPKSDADFFDYENKYAADGAEEICPAPVDDTLTKSIQQQMVTAHAA
LGLTGYSRGDFMVTKKGEAFLLEVNTLPGMTPTSLLPRAAANIGLSFTDLIAELIRLGME
TRTH
NT seq 915 nt   +upstreamnt  +downstreamnt
atgcatgtgattttgatagctggcggctggtctgacgaacgggaagtttccctgtccggc
gctgccaagattcgaatggccctggacgaactcggtcacaacgtttccttcttcgaccct
gctgatgatttcaaaaaactattggcaacagccaaacaggcggactttgcgttcatcaac
ctgcacggcactccaggtgaagacgggttagtacaagcggtgctcgacaaggcaggctgc
ccatatcaaggagccggtcccgccgcgtcatacctagccctgaacaaagctgcgtccaaa
gaagtcttcgaagataagggcattaaaacaccagactggcagatcgtcactcccactcaa
ggccgagaagcacagcttaaactgaacctcccggttttcgtgaaaccaaacaagggcggt
tccagcctcggcatgtcgctggtcaaacgcattgaagatttcccggcagcacttgataag
gtcttttccatgtgtcagtccgctttagtggaatcattcattcccggtgtggaactgaca
tgcggtatgctcggcgaccgtccgcttccactgataatgatcaagcccaaaagtgacgcc
gatttctttgactacgaaaacaaatacgcggctgatggagcagaggaaatctgtccggca
cccgttgacgacactctcaccaaatccattcaacaacagatggtaacggcacacgccgcg
ctaggtctcacaggatacagtcgaggtgatttcatggtcacgaaaaaaggcgaagctttt
ctgctggaggtcaataccttgcccggcatgaccccaacgagcctgctgcctcgtgccgcg
gccaacatcggcctttctttcactgaccttatagccgaactcatccgactgggcatggaa
acgaggacacactaa

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