Pseudodesulfovibrio nedwellii: SYK_34500
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Entry
SYK_34500 CDS
T09024
Name
(GenBank) 12,18-didecarboxysiroheme deacetylase
KO
K22226
Fe-coproporphyrin III synthase
Organism
pnw
Pseudodesulfovibrio nedwellii
Pathway
pnw00860
Porphyrin metabolism
pnw01100
Metabolic pathways
pnw01110
Biosynthesis of secondary metabolites
pnw01240
Biosynthesis of cofactors
Module
pnw_M00847
Heme biosynthesis, archaea, siroheme => heme
Brite
KEGG Orthology (KO) [BR:
pnw00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
SYK_34500
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Motif
Pfam:
Radical_SAM
Fer4_12
SPASM
Motif
Other DBs
NCBI-ProteinID:
BDQ39090
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Position
complement(3746198..3747391)
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AA seq
397 aa
AA seq
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MIGISKLYCGAVEPSDALRYSRESGQLPSHLLQFSKDKKPVVVWNMTQRCNLKCVHCYAQ
AVDINAHKDPISNEKAKEMIDDLAQFGAPVMLFSGGEPLVREDLVDLAKHATAKGMRAVI
STNGTLITKSKARELKEVGLSYVGISIDGNEAVHDEFRGVTGSYKQALKGVENCQAEGLK
VGLRFTINKRNAPEIPHLFSLIEDLEIPRICFYHLVYSGRGSELIKEDLNHQETRDVVDL
IMDHTKALFEKGKPKEVLTVDNHADGPHVYYRLLKEDPERAKEVLELLKMNEGNSTGRGI
GCISWDGKVHADQFMRHHTFGNVLERPFSEIWNDPKIELLHKLKDKRPHVGGRCAKCRFL
NICGGNFRARAEAYYDDFWAQDPACYLTDEEITGEKL
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atgatcggtatttccaagctctactgcggagcagtagaaccttctgacgccctgcgttac
agtcgtgaatcagggcagttgccctcccatcttctccaattttccaaggacaagaagccc
gtcgtggtctggaacatgacccaacggtgtaaccttaaatgtgtccattgttacgctcag
gccgttgatatcaacgcgcacaaggacccaatttccaacgaaaaagccaaagagatgata
gatgatctcgcccaattcggcgcacctgtcatgctcttttccggtggcgagcctctggta
cgtgaagacttggtcgacttggccaaacacgcaaccgccaagggcatgcgtgcagtcatc
tctaccaacggcacgctcatcacaaaatcaaaagccagagaactgaaagaagttggtctc
tcttacgtcggtatatccatcgatggtaatgaggcggtccacgatgaatttcgtggcgtg
accgggtcctacaaacaggcactcaaaggcgttgagaactgtcaggcagaaggcctcaaa
gtcggcctgcgtttcaccatcaacaagcgtaatgctcctgagatcccccatctcttcagt
ctcattgaagacttggaaattccccgcatctgtttctaccacctggtatattccggtcgt
ggttccgaactgatcaaagaagacctgaaccatcaggaaacccgtgacgttgtcgatctg
atcatggaccacacaaaggcattgtttgaaaaaggcaagcccaaggaagttctgaccgtg
gacaaccacgcagacggtccgcatgtctattatcgtcttctcaaggaagacccggaacgt
gccaaggaagtacttgaactgctcaagatgaacgaaggcaactccacgggacgcggcatc
ggctgtatctcctgggacggcaaagttcacgctgaccagttcatgcgccatcatactttt
ggcaacgtgctggaacgtcctttctccgaaatctggaacgatcccaagatcgaactgctc
cacaagctcaaggacaaacgtcctcatgtgggcggccgttgcgccaagtgtcgcttcctc
aatatctgcggcggcaacttccgcgcccgtgcagaagcctactatgatgacttctgggcg
caggatcctgcctgctatctcaccgacgaagaaatcaccggcgaaaagctgtaa
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