Populus nigra (Lombardy poplar): 133667854
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Entry
133667854 CDS
T10372
Name
(RefSeq) probable disease resistance protein At4g27220 isoform X1
KO
K13459
disease resistance protein RPS2
Organism
pnz Populus nigra (Lombardy poplar)
Pathway
pnz04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
pnz00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
133667854
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Gene cluster
GFIT
Motif
Pfam:
NB-ARC
LRR_RPS2
LRR_8
LRR_14
WHD_DRP
LRR_4
ATPase_2
LRR_R13L1-DRL21
LRR_Zer-1
AAA_22
NACHT
nSTAND_NTPase5
AAA_5
KAP_NTPase
AAA_16
AAA_14
nSTAND6
AAA_7
AAA_18
LRR_EndoS
NPHP3_N
nSTAND3
zf-BED
Pox_A32
RNA_helicase
LRR_LRWD1
Trm112p
ALF
Motif
Other DBs
NCBI-GeneID:
133667854
NCBI-ProteinID:
XP_061943519
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All DBs
Position
11:14820003..14833693
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AA seq
1102 aa
AA seq
DB search
MELVCLILCCKCKEKMLRSYDPFWNDVEKMDDGRMECKFCGHLFAKGTSISRVKLHLSGV
KRRGVKICKDVPEEVQEAARAAIDGPPEKKLKTVAGSGSNDASNAISASAQEQNNEGRLV
EMAQQGEAFSPGELEEWVDSITDKEIEPMHDAFETIPRTEQVQHVERGSSLERPSINQAD
EPRGDSSQPTDPLCRDHGIYYDQLWSPLVNNDFTMNDVQNMVRVRTEPEEEKEEEENVEN
NSGRSVQPGIGASSSGGLKYDACETRGDPLPLGSTRLVGQAFEENIHVIRSLLIEDEVSI
IGIYGMGGVGKTTMLQHIHNELLQRPEFYHVYWVTMSRDFSINRLQNLIAKRLDLDLSSE
DDDVSRAVKLSKELRKKKKWIIILDDLWNCFRPHKVGIPIPLKGCKLIMTTRSKRICDRM
DCQHKIKVMPLSEGEAWTLFMEEFRHDITFSPKVERIAVAVIRECAGLPLGIITVAGSLR
GVDDIHEWRNTLKRLKESKLRDMEDEVFRLLRFSYDRLDDLTLQKCLLYCTSFPEDHKIE
REELIDYLIDEGIVEGIGRRQEELDEGHTMLNRLEDVCLLEWGRLCNIRRFVKMHDLIRD
MAIQILQENSQVIVQAGAQLRELPDAKEWTENLTRVSLMHNHIKEIPSSYSPRCPHLSTL
LLCHNERLGFIADSFFKQLFGLNVLDLSYTNIENLADSVSGLVSLTTLLLKGCEKLRHVP
SLQKLRALKKLDLSNTTLEKMPQGMECLFNLRYLRINGCGEKEFPSGILSKLSHLQVFIL
EEWMPTGFESEYVPVTVKGKEIGCLRKLETLECHFEGHSDLVEYLKSRDENHSPSTYKIF
VGLFEEFHLLDKYTYCRDKSVWLGNLTFNRDGNFQDMFLNDLQELLIYKCNDATSLCDVP
SLMKTATELEVISIWDCNGIESMVSSSWFCSAPLPSSSYNGIFSSLKKFNCYRCRSMKKL
FPLALLPSLVNLEQIIVYDCEKIEEIIWTRSDEEDVVGKEESSSNIEFKLPKLRVQDLCD
LPKLKSICSAKLICDSLEEIEVSYCQELKRMEIFPPVLENGQPSPPPSLARICIYPKEWW
ESVVEWEHPNTKDVLLPFVVFL
NT seq
3309 nt
NT seq
+upstream
nt +downstream
nt
atggaacttgtgtgtttgattctatgctgcaagtgtaaggagaaaatgttacgatcatat
gatccgttctggaatgatgttgaaaaaatggacgatggtaggatggagtgtaagttctgt
gggcatttatttgccaaaggtacttccatttcgagggtcaaattacatttatcaggagtg
aaacggcggggtgttaaaatctgtaaagatgtcccagaagaagttcaagaagcagcccgt
gcagcaattgatggccctccagaaaaaaaacttaaaactgtagcaggctcaggaagtaac
gatgccagtaatgcaatttcagcttcggcacaagaacagaacaatgaagggagacttgta
gaaatggcacagcaaggagaagctttttcccctggagagctcgaagagtgggtggatagc
atcactgataaagagattgagcctatgcatgatgcatttgagactataccgagaacagaa
caagtgcagcatgtggagagaggtagctctctcgagaggccatcaattaatcaagctgat
gagcctcgaggagattcatcccaaccaacagatccgttgtgccgtgaccatggaatatat
tatgatcaactctggtctccattagtaaacaacgatttcactatgaatgatgtgcagaac
atggttagagtgaggacagaaccagaggaggagaaggaggaggaggagaatgtggagaat
aatagtggaagatcagtgcagcctggcataggagctagttcttccggaggccttaaatac
gacgcctgtgagactagaggagatccattgcctcttggatctacaaggctagtgggtcaa
gcatttgaagagaatatacatgtgatacgatctttattaatagaagatgaagtctcaatc
attggcatttatggaatgggaggagttggtaaaacaacaatgctgcaacatatccataat
gaacttctacaaagaccagaattttatcatgtttactgggtgactatgtctcgagatttt
agcattaatagattacaaaatcttattgctaaacgtcttgatttagatctttcaagtgaa
gatgatgatgtgagtagagctgtcaaattgtcaaaagaactaagaaagaaaaaaaaatgg
attattattttagatgatttgtggaactgttttagaccacacaaagtgggaattcctatc
ccattgaaaggatgtaagttgattatgacaactcgatcaaaacggatttgtgatcggatg
gattgtcaacacaaaataaaagtgatgccactttctgagggagaagcttggactttgttc
atggaggaatttcgacatgacataacattttctccaaaagtggaacgaattgcagtagct
gttataagggaatgtgctggtttgccattggggattataacagtggcgggaagcttgagg
ggagtggatgatatacacgagtggagaaatacattgaagagattgaaagaatctaaactt
agggatatggaagacgaggtattccggttattgaggtttagttatgaccgtttagatgat
ttgaccctacaaaaatgtctcttatattgcacatcgtttcctgaagatcataagattgaa
agggaggagttgatagattatttgatcgatgaaggaatagtggaaggaatagggaggagg
caagaagaacttgatgaaggccacaccatgctcaatagacttgaagatgtctgcttattg
gaatggggtagattgtgtaatattcgtagatttgtcaagatgcatgacttgattagggac
atggccatccaaatactgcaagagaactcccaagtcattgttcaagcaggtgcacaatta
agagaattacctgatgcaaaggagtggacagagaatcttacaagagtttcactaatgcat
aatcacattaaagaaattccttccagttattcgccaaggtgtccccatctgtcaactcta
ttactatgtcataatgaaaggttgggatttattgcagattcattttttaagcaattattt
gggctcaatgttcttgatctgtcttatacaaatattgaaaatttggcggattctgtctct
ggtttggtgagtctcactactttattacttaaaggttgtgagaagttaagacatgtacca
tcattacagaagctcagggcattgaagaagttagatctctctaatacaacacttgaaaag
atgcctcaaggcatggaatgtctattcaacctgagatatcttagaattaatggatgtggt
gagaaggagtttcctagtgggatactatcaaaactctctcacttgcaagtctttatatta
gaggagtggatgcctactggatttgaatcagaatatgtcccagtaacagttaagggaaag
gaaatagggtgcttgaggaagttggaaactttagaatgccactttgaaggtcattctgac
ttggtagagtatctcaaatctcgggatgagaaccactcaccaagtacatacaaaattttt
gtaggtctgtttgaggagtttcatctcttagataagtacacgtattgtagagataaaagt
gtttggttgggtaatttgactttcaacagagatgggaattttcaggacatgttcttaaat
gaccttcaagaattgctgatttataaatgtaacgatgcaacaagtttatgtgatgttcca
tccttgatgaagactgcaactgaactggaggtcatcagcatttgggattgcaatggcata
gagagcatggtttcatcttcttggttttgctctgctccactaccatcttcatcttataat
ggaatattttcaagtcttaaaaagttcaattgttatagatgtagaagcatgaagaagctg
ttccctcttgccttgttgccaagccttgtaaacctggaacagattatagtttatgattgt
gagaaaatagaggagataatatggacaagatcagatgaagaagatgttgtgggtaaagaa
gaaagcagcagcaacatcgaattcaaactcccaaagttaagagttcaggacttgtgtgac
ttaccaaaacttaaaagcatttgtagtgcaaagctgatttgcgattctctcgaagaaatt
gaagtatcatattgtcaggagctaaagagaatggagattttccccccagtgcttgaaaat
ggccagccatctcctcccccttctcttgcaagaatatgtatatatccaaaagaatggtgg
gagtcagtagtggagtgggagcatccgaacacaaaggatgtccttctaccctttgtagtg
tttttatag
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