Populus nigra (Lombardy poplar): 133667857
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Entry
133667857 CDS
T10372
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 57
KO
K14779
ATP-dependent RNA helicase DDX52/ROK1 [EC:
5.6.2.7
]
Organism
pnz Populus nigra (Lombardy poplar)
Brite
KEGG Orthology (KO) [BR:
pnz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pnz03009
]
133667857
Enzymes [BR:
pnz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
133667857
Ribosome biogenesis [BR:
pnz03009
]
Eukaryotic type
90S particles
Helicases
133667857
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
P-loop_SecA
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
133667857
NCBI-ProteinID:
XP_061943522
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All DBs
Position
11:5456593..5461903
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AA seq
531 aa
AA seq
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MEKDTSFLLTGIKFNKKRFAGDFSRFKKRKQRNDDGPVDDLSYFKREDTEAEKVVVSVNK
KRKRKTKAERVEGFSVFKGSDSVPVVTDEGSEQEENNQKELNRQNERDLRLRKKYGIHVS
GNNVPSPLQSFAELSTRYGCESYLLHNLVKLGFKEPTPIQRQAIPVLLSGRECFAKAPTG
SGKTLAFVYPMLMKLKQPSKDGIRTVILCHTRELAAQTTRECKKMAKGSKFRIKLMTKEL
LRNTDFTKLPCDILISTPRRLQLCICKKKKKIDLSRVEYLVLDESDKLFERSLLEQTDSV
VKACSNPAIIRSLFSATLPGFVEDVARTVMHDAVRVIVGDKNAASESIKQKLIFAGSEEG
KLLALRQSFAESLNPPMLIFVQSIERAEELYGELKFDSIRVGVIHSNLSQEQRESVIDDF
RAGKTWVLIATDVLGRGMDFKGVKCVINYDFPDCAASYIHRIGRSGRAGRIGEAITFYTE
HDIPYLRNIANVMTASGCEVPSWLTDMPKKKWKKHCPRRESISTKPKDEEE
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atggagaaagacacctcctttttactcactggcatcaaattcaataagaagaggtttgcc
ggtgatttttcccgcttcaagaagagaaaacaaagaaatgatgatggtccagtggatgat
ttgagctacttcaaaagagaagatactgaagcagagaaagtggtagtttctgtcaataag
aagaggaagaggaaaactaaagcagaaagggtggaggggttcagtgtgtttaagggttca
gattcggtgccggtggtgaccgatgaaggaagtgagcaggaggaaaataatcagaaggaa
ttaaataggcaaaatgagcgggatttacgtttaaggaagaagtatggcatccatgtctct
ggaaacaacgttccatcccctctgcaaagttttgcagagttaagcacaagatatggatgt
gagtcatatttattgcacaatttggtaaaacttggattcaaggagccaacaccaattcaa
aggcaggctattccagtcctcctatctggtcgggaatgctttgcaaaagcaccaactgga
tctgggaaaactttggcttttgtgtatcccatgctcatgaaattgaagcaaccatcaaag
gatgggatcagaactgttatcttgtgtcatacacgagagttagcagctcagacaaccagg
gagtgcaagaaaatggctaaaggaagtaaattccgtattaagctaatgaccaaagagctt
ttgagaaatactgatttcacaaagctaccttgtgatatccttatatcaacacctcggcgt
ttacagttatgtatctgcaagaagaagaagaagatagacttaagcagggttgagtatctt
gttctcgatgaatctgataagctatttgagcgcagcttgttagagcagactgattctgtg
gtgaaagcatgctctaacccagcgataatacgttctctgtttagtgctaccctacctggt
tttgtcgaggatgttgcacgcactgttatgcatgatgctgttagagttattgttggtgac
aagaatgcagcttctgaatctatcaaacaaaaattgatcttcgctggaagtgaagaagga
aaacttcttgcactccgtcaaagcttcgcagagagtctgaatccaccaatgttgatcttt
gttcaaagcattgagcgagcagaagaactatatggagagctgaaatttgacagcattaga
gttggtgttattcattcgaatctatcacaggagcagcgagagagtgtaatcgatgacttc
agagctggaaagacatgggttttgattgcaactgatgtgcttggtcggggtatggatttc
aaaggtgtcaagtgtgtgattaattatgatttcccagattgtgctgcttcatacattcac
aggattggtcggtcgggcagagcagggaggattggtgaagctattactttctacacggaa
catgatattccatatttgcgaaacatagctaatgtgatgactgcttcaggctgtgaggtt
ccatcttggctcacggatatgcccaaaaagaagtggaagaagcactgtccacgaagagaa
tcaatctcaacaaaaccaaaagatgaggaagaatga
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