Populus nigra (Lombardy poplar): 133667902
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Entry
133667902 CDS
T10372
Name
(RefSeq) U-box domain-containing protein 13-like
KO
K27628
U-box domain-containing protein 12/13/14 [EC:
2.3.2.27
]
Organism
pnz Populus nigra (Lombardy poplar)
Pathway
pnz04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
pnz00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
133667902
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pnz04121
]
133667902
Enzymes [BR:
pnz01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
133667902
Ubiquitin system [BR:
pnz04121
]
Ubiquitin ligases (E3)
U-box type E3
133667902
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Arm
U-box
ARM_ARMC5
HEAT_2
MLKL_N
Arm_2
Neurochondrin
zf-RING_UBOX
zf-C3HC4_4
zf-Nse
HEAT_EZ
KAP
zf-C3HC4_2
zf-C3HC4
Motif
Other DBs
NCBI-GeneID:
133667902
NCBI-ProteinID:
XP_061943598
LinkDB
All DBs
Position
1:24922935..24927421
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AA seq
663 aa
AA seq
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MEEEENGGGEVVDILIETVNKIASISDYRCTVKKQYCNLARRLKLLIPMLEEIRDSKDSI
IPQQTLKALVLLKQALDSAKDLLIFGCEGSKIYLVLEREQIMNKYHEVTAKLEQALSGIS
YEGLDISDEVKEQVELVLAQFRRAKGRVDATDVELYEDLLSLYNKTNDSASDLAVLRRIS
EKLQLMGIADLTQESLALHEMVAATGGDPGESIEKMSMLLKKIKDFVQTENPNLDAPERE
KNLPPGGSGLVDGSRQMPVIPDDFRCPISLELMKDPVIVSTGQTYERSCIEKWLGAGHDT
CPKTQQKLTSTAPTPNYVLRSLIAQWCEANGIEPPKRPSSSGTSKTVSTCSLAERTKIEI
LLHKLTSGCLEDQRSAAGEIRLLAKHNADNRVAIAQAGAIPLLVGLLSTPDPRIQEHAIT
ALLNLSICEDNKGSIVSAGAVPGIVHVLKKGSMEARENAAATLFSLSVVDENKVTIGFMG
AIPPLVTLLSEGTQRGKKDAATALFNLCIYQGNKGKAVRAGVVPTLMCLLTETGGGMVDE
ALAILAILASHPEGKATIGAAEAVPVLVEVIRNGSPRNRENAAAVLVHLCSGDQKHMVEA
QEHGVMGPLVDLAQNGTDRGKRKAQQLLERISRFVEQQNHSQAQAEAHIQQPQPSSMTNF
GDS
NT seq
1992 nt
NT seq
+upstream
nt +downstream
nt
atggaggaagaagagaatggaggaggtgaggtagtagatattttgattgagacagtgaac
aagattgcttcgatctcagattacagatgtacggtcaagaaacagtattgcaatctagcc
aggaggttgaagttgttgataccaatgttggaagagattagagacagcaaagactccatc
atccctcaacaaactctcaaagctcttgttttgctcaaacaagctttggattccgctaaa
gatttgcttatatttggttgcgaaggaagcaagatttacttggtcctagagagggaacaa
attatgaataaataccatgaggtgacagctaaattggagcaagctctaagtggaatttcc
tatgaaggcctggacatatctgatgaagttaaggagcaggttgagcttgtccttgctcaa
tttagaagagccaaaggaagggtcgatgctaccgatgttgagctgtatgaagatctcttg
tccctttacaacaagaccaatgattcagcatcagatcttgctgtcctaagaagaatatct
gaaaaattacaattgatgggaatagctgaccttacacaagagtctctagctttgcatgag
atggttgctgctactggaggagatcctggggagagcattgagaagatgtcgatgcttttg
aagaaaattaaagattttgtgcaaacagaaaacccaaacctggatgcacctgaaagagaa
aagaatcttcccccaggtggcagtggacttgttgatggaagtcgccagatgccagttata
ccagatgatttccgctgtccaatatccctggaattgatgaaggatcctgtaattgtttca
acagggcagacctatgaacgttcctgcattgagaaatggctgggagcaggacatgacact
tgtccaaagacgcaacagaaactcactagtactgctccgacacccaactacgttctacga
agcctcatagcgcagtggtgtgaagccaatggcattgagccaccaaaaaggcccagcagt
tctgggacaagtaaaactgtatctacttgctcacttgctgagcgtacaaagattgaaatt
ctcctccacaagcttacatctggctgcctagaagaccagcggtctgctgccggggagatc
cgtcttcttgccaagcacaacgctgataatcgtgtggctattgctcaagctggtgcaatc
cctctccttgttggcctcctctctacacctgaccctcgcatccaagaacatgcaattaca
gcgcttcttaacctctccatatgcgaagataacaaaggaagcattgtatcagctggggca
gttcctggtattgtgcatgtgctcaagaagggcagcatggaagctcgagaaaatgctgca
gccacccttttcagcctttcagttgtggatgaaaataaggttacaattggttttatgggg
gctatcccacctctggtgacacttctaagtgaaggtacacaaagggggaagaaggatgca
gcgactgcacttttcaacttgtgcatctaccaggggaacaagggaaaggcagtgagggcc
ggagttgtgcccacattgatgtgtctattaacagaaaccggaggtggaatggtggatgag
gcactggctatactagcaatactggctagccaccctgaagggaaggcaaccattggagct
gcagaggcagtgccagttttggtggaagttatcaggaatgggtcacccaggaacagagag
aatgcagcagcagtgttggtgcatctttgttctggagaccagaaacatatggtagaggca
caagaacatggagttatgggaccgctggtggatttggcacaaaatggcacagaccgggga
aagaggaaggctcaacagttgcttgagcgtataagcagatttgttgagcaacaaaatcac
tctcaggcacaagctgaggctcatatccagcagcctcagccatcctccatgactaatttt
ggtgatagctga
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