Populus nigra (Lombardy poplar): 133668030
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Entry
133668030 CDS
T10372
Name
(RefSeq) F-box/LRR-repeat protein 3-like
KO
K10268
F-box and leucine-rich repeat protein 2/20
Organism
pnz Populus nigra (Lombardy poplar)
Brite
KEGG Orthology (KO) [BR:
pnz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pnz04121
]
133668030
Ubiquitin system [BR:
pnz04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
133668030
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_FBXL15
LRR_SKP2
LRR_6
LRR_At5g56370
LRR_4
LRR_8
DH_Alsin
Motif
Other DBs
NCBI-GeneID:
133668030
NCBI-ProteinID:
XP_061943751
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All DBs
Position
11:complement(835331..840182)
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AA seq
667 aa
AA seq
DB search
MRTNKKTTCNCNPFDFLTEEIIFTILDYLNDDPLAKKSFSLTCKAFHSIESHHRKTLKPL
RAEILSRTLHRYPHIEHLDLTVCPRIEDSMLNVVSLACKDALCSINLSRSRFFTNIGLSS
LVSSCFNLVEIDLSNGVELNDLAAAAIAEAKNLEKLWLARCKLITDLGIGCVAVGCRKLR
LICLKWCLKISDLGVQLLALKCKGIRSLDLSYLQITEKCLPSILQLQHLEDLVLEGCLGI
NDDGLSTLQQSCKSLKTLNMSNCHNHSQVGLSSLINGAENLRELTLAYGPSVTADLAKCL
HNFSGLHSVKFDGCLVKCSGIRAIGNWPNSLKELSFSKCSGVADDSLSFLVQGHKELRKL
DITCCRMIMYDSVDSITSSCRSLNSLRMESCSLVPKEAFVLFGQRCQLMEELDVTDTKID
DEGLKSISRCTKLSSLKLGICMNITDNGLKHIGSRCSKLKELDLYRSLGITDEGIAAVTF
GCPDLEVINIAYNDKVTDASLISLSRCSRLRVLEIRGCPHVSSKGLSAIAVGCRQLMVLD
IKKCFNINDNAMLSLAQFSQNLKQINLSYCSVTDVGLLALASVNRLQNITVLHLGGLTPN
GLAAALLACRGITKVKLHASFKPLIPKSLLGYIEAHGCVFHWRDKAFQVEMDTKGWKLHF
GKSAEAP
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
atgagaaccaacaagaaaaccacttgcaattgcaacccctttgattttctcactgaagag
atcatctttacaatccttgactatcttaacgatgacccccttgctaaaaagtcgttttct
ttaacctgcaaagcgtttcactccattgaatctcaccatagaaagacccttaagccactt
agagctgagattttatcaagaacccttcataggtaccctcatattgaacatcttgatcta
actgtttgccctcgcattgaagacagcatgttgaatgttgtttcattggcatgtaaggat
gctttgtgttccataaacctgtcaagatcaaggttttttactaatattgggttgtcaagt
ttggtttcaagttgtttcaatttggttgagattgatttgtcaaatggggtagagttgaat
gacttggctgctgctgcaattgctgaggctaagaatttggagaagttgtggctggccagg
tgtaagttgattactgatctggggattgggtgtgttgctgttggctgtagaaagttgagg
ttgatttgcttgaaatggtgtttgaagattagtgatcttggtgtgcagttgcttgctttg
aaatgtaaggggattaggagtttggatctctcttacttacagattacagagaaatgtctg
ccatctattttgcaattgcagcatcttgaagatctagttcttgagggatgccttggtatt
aatgatgatggcctctctactctccaacagagttgcaagtcactcaagacacttaatatg
tccaactgtcataatcacagtcaggtgggtttgtcgtctctgataaatggtgctgaaaat
ctacgagaacttactttagcttatggcccttctgtaactgcagatctggcaaaatgtttg
cataacttttcagggttgcattcggttaagtttgatggctgtttggttaaatgttccggt
attagagccattggaaattggcctaactcactcaaggaattgagcttcagtaagtgctca
ggggtcgcagatgacagtctatccttcttagtgcaaggacacaaagaattgaggaaatta
gatatcacatgctgtcgcatgataatgtacgactctgtagacagcataacaagttcatgc
cgttctctcaattccctcagaatggagtcctgtagcctggttcccaaagaagcatttgtc
ttgtttggacagcgttgtcaacttatggaggaattagatgtcacagataccaaaatcgat
gacgaaggtttgaagtccatctcaagatgtaccaaactttcaagtttaaagttaggcatt
tgcatgaacataaccgacaatggactaaaacatattggaagcagatgttcaaagctcaaa
gagcttgatttgtataggtcattgggaataactgatgagggcattgcagcagttactttt
ggatgtcctgatctggaggtcattaacatagcttacaatgataaagttacagatgcttca
ttaatatcattatcaagatgttcaaggttaagagtgcttgagatcagaggatgtcctcat
gtctcatcaaaaggtctatcagctattgctgtcggatgtaggcaacttatggtactggac
attaagaagtgcttcaatatcaatgataatgcaatgctctcacttgctcagttttcccaa
aacctcaaacagataaacttgtcgtattgttcagtaacagatgttggccttttggcacta
gccagcgtgaatcgccttcagaacataactgtgttacacttgggaggattaactccaaat
ggcctggcagctgctctattagcttgtagaggaataactaaagtgaagctacatgcttcc
ttcaaaccattaattcctaaatcccttctcggttacatcgaagcccatggctgtgtattt
cattggagagataaagcattccaggtggagatggatacaaagggatggaagttacatttt
gggaaaagtgctgaagctccatag
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