KEGG   Populus nigra (Lombardy poplar): 133668196
Entry
133668196         CDS       T10372                                 
Name
(RefSeq) putative lysine-specific demethylase JMJ16
  KO
K11446  [histone H3]-trimethyl-L-lysine4 demethylase [EC:1.14.11.67]
Organism
pnz  Populus nigra (Lombardy poplar)
Brite
KEGG Orthology (KO) [BR:pnz00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:pnz01009]
    133668196
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:pnz03036]
    133668196
Enzymes [BR:pnz01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.67  [histone H3]-trimethyl-L-lysine4 demethylase
     133668196
Protein phosphatases and associated proteins [BR:pnz01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     133668196
Chromosome and associated proteins [BR:pnz03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    133668196
SSDB
Motif
Pfam: JmjC FYRC JmjN zf-C5HC2 FYRN KDM5_C-hel
Other DBs
NCBI-GeneID: 133668196
NCBI-ProteinID: XP_061943940
LinkDB
Position
11:13176890..13188250
AA seq 1268 aa
MMGTELIRVRVKEENDDIPSVPPGFESFAAFNLNRVQDGEKQESNIISCSATASASESLP
VKMETGFEDEAKVTRSLRRRPWIKYGHLDGCSEDESDSAKLNQNLSSRSQLPKGVIRGCP
QCSNCQKVSARWRPEYARKPDIEDAPVFYPTEEEFEDTLKYIASIRPKAEQYGICRIVPP
PSWKPPCPLKEETVWEGSTFATRVQRVDKLQNRDSMRKMSTMSNHTRKKRRRCMRMAIDC
GADIGSISRSNDTGVCEAESFGFEPGPLFTLDKFKKYADDFMAQYFRKDENTINKGGSMT
MLQENCEPTLDNIEGEYWRIVEKATEEIEVLYGADLETGVFGSGFPKTSSEVGSATNDRY
TKSGWNLNNFPRLPGSVLSFESGDISGVLVPWLYIGMCFSSFCWHVEDHHLYSLNYMHWG
AQKIWYGVPGKDAVKLEEAMRNYLPDLFEEQPDLLHKLVTQLSPNILKSIGVPVYRCVQN
SGEFVLTFPRAYHSGFNCGFNCAEAVNVAPVDWLPHGQTAIELYREQGRRTSISHDKLLL
GAAREAVRAHWELNLLKRNKLNNLRWKDMCGKDGILAKAFKERVETEHLRRQFLCNSSPA
LKMESDFDATSERECSVCLFDLHLSAVGCHCSPDKYACLNHAKQLCSCVSGAKFFLFRYD
ISELNILVEALEGKLSAVYRWARLDLGLALTSFVSKDNAEEGKLSCSPKRTAIEQVRSHA
SADLHKVSPGRTISGDFRMNSAGVCWQIAAEEEKKPPEDVPSKDARASSVSHSSFQVIEK
ENDNFKLNQKGSSLLSTNLRTLACQLSQEDPSYTAGLASEKCERKKPSTLCNDNIILLSD
DEGDELKPISERAKENVSVNPSSLSEKLSISHDRSCNDNKDSILTFAVINGAVKSEKNVS
LFPDENNSPSGPLQVKDGYNQDGGKVLGFNQPNGFCHAGPSTAGFGRNIQNFSSNRDAGK
DNRMANAGSQQPQPCGSGKPNIEDEMGANATSTSVDNSRTMAGSPSSSQNNLDRYYRQKG
PRIAKVVRRINCNVEPLEFGVVLSGKSWCNSQAIYPKGFRSRVRYLSVLDPINMCYYVSE
ILDAGRNSPLFMVSLEHYPNEVFIHVSAARCWEMVRERVNQEIAKQHKTGRTNLPPLQPP
GSLDGFEMFGFSSPAIVQAVEALDRNRVCTDYWDSRPYSRPQGQIPQHSQSKANARHSQG
TSEDQNNRKVPGSQFLPVEVDTTLGGLFKKASPEELILLSRVLSDNKPTANPGLITQLLN
EEIHNRPR
NT seq 3807 nt   +upstreamnt  +downstreamnt
atgatgggaactgaactcattagagttcgtgttaaggaggagaatgatgatatcccatca
gttccacctggttttgagtcatttgcagctttcaacttgaacagggtgcaagatggtgaa
aaacaagaaagtaatataatcagttgttcagccactgcgagcgcttctgaatcattgcca
gtcaagatggagacggggtttgaggatgaagcaaaagttacaaggtccctccggcgtaga
ccctggataaagtatggacatttggatggctgttcagaggacgagtctgattctgcgaag
cttaatcaaaatctctcctcgaggtctcaacttcccaagggagtgatccgtggatgtcca
caatgcagtaattgccaaaaggtcagtgcaagatggcgaccagaatatgctcgcaagcct
gacattgaggatgctcctgtattctacccaactgaagaggagtttgaagatacattgaaa
tatattgctagtatacggcctaaagctgaacaatatggaatctgtcgcattgttcctcct
ccttcttggaaacctccctgtcctcttaaggaagaaactgtttgggagggctctacattt
gcaactcgtgtccagagggttgacaaactgcagaaccgggattctatgagaaagatgtca
acgatgtctaaccataccaggaagaaaaggagaagatgcatgaggatggcaatagattgc
ggggcagatattggaagtatctcaaggtctaatgatactggtgtttgtgaagctgagagc
tttgggtttgaacccggtcctctgtttactttggataaatttaagaaatatgctgatgat
ttcatggcccagtacttcaggaaggatgagaatactattaataaaggaggcagcatgaca
atgcttcaggagaactgcgaaccaacattggataatattgagggtgaatattggcgaatt
gtagagaaagcaactgaagaaattgaggtcctatatggagctgatctggaaacaggggtt
tttggcagtggatttccaaaaacatccagtgaagttggttctgctacaaatgatcgttat
acaaaatcaggctggaacttgaataactttccgaggcttcctggatctgttctttccttt
gaaagtggtgatatatctggtgttttggtgccatggctgtatatagggatgtgcttctcc
tccttctgttggcatgttgaagaccatcacctatattcactgaattacatgcattggggc
gcgcaaaaaatatggtatggtgtccccgggaaggatgctgttaaattggaagaggccatg
agaaattatttacccgatctgtttgaagaacaacctgatttgctccataagctggtgact
cagctctccccgaacatactaaaatctataggagtgcctgtctatcggtgtgttcagaat
tctggagagtttgtgctaacctttcctcgagcatatcattcagggtttaattgcggtttc
aattgtgcggaggcagtgaatgtagctcctgttgactggttgccccatggacagactgct
atagagctataccgtgagcagggacggaggacttccatctcccatgataaattgttgctt
ggggcagcaagggaagcggtgagagcacattgggaactgaatttacttaagaggaataaa
ttgaataacttaagatggaaagacatgtgtggaaaagatgggatattagcaaaagcattc
aaggaacgtgtggagacagagcatttgaggagacaatttctctgcaattcttccccagca
ctgaagatggagagtgattttgatgccacaagtgagagggaatgcagtgtttgccttttt
gatttgcacctgtctgcagtggggtgtcattgttctccagacaagtatgcatgcctgaat
catgcaaaacagctgtgttcatgtgtttcgggtgccaaatttttcctgtttcgctatgac
atcagtgaattaaatatccttgtggaggctttggaaggaaaattgagtgcggtgtaccga
tgggcaagactggatcttggacttgccctgacttcttttgtttccaaagacaatgctgaa
gaaggtaaattatcatgttctccaaaaagaactgcaattgaacaggtgagatcacatgcg
tcagcagatctccataaagtttcaccagggagaacaatatctggtgacttcagaatgaat
tcagctggggtctgttggcagatcgccgcagaagaagagaagaaaccacctgaagatgta
ccttcaaaagatgcaagggcatcatctgtatctcatagttcttttcaagtaattgagaag
gaaaatgacaatttcaagctaaaccagaaaggttctagtcttttgtctacaaatttaagg
acactagcttgccagttgtctcaagaagacccatcctatactgcaggcctggcttcagag
aaatgtgaaaggaagaagccttcaactttgtgtaatgacaatattattcttcttagtgat
gatgaaggcgatgaactgaagccaatttcagaaagggcaaaagaaaatgtttctgtaaac
ccttcctcactttcagagaagctatcaatttcgcatgataggtcatgtaatgacaataaa
gattcaatcttaacttttgctgtgatcaacggagcagtaaagagtgaaaagaatgtcagt
ttgtttcctgatgaaaacaattctccatctggtcctttgcaagtgaaggatggctataat
caagatggtggaaaggttttgggatttaatcaaccgaatggcttttgccatgcaggtcca
agcactgcaggttttggtaggaatattcagaacttctcatctaatagagacgccggcaag
gataacaggatggcaaatgctgggagtcagcaaccacagccatgtggcagtggaaagcct
aacattgaggatgagatgggagcgaatgccacctcaacttcagtagacaactcaagaact
atggctggtagcccatcttcctcgcaaaataatttggacaggtactaccgccagaagggt
ccccgcattgccaaggtagtgcgaaggatcaattgtaatgttgaacctctggaatttggg
gttgtgctttctgggaagtcatggtgcaacagccaagcaatctatcccaaagggtttaga
agccgagttaggtacttaagcgttttagatccaatcaatatgtgttactatgtctcagaa
atactggacgcagggcgaaatagtcctctatttatggtttccttggagcattacccaaat
gaggtatttattcatgtttcagcagccagatgctgggaaatggtgagagagagagtgaat
caggagatcgcaaagcagcataaaactggaagaacgaatcttccacctttacaacctcct
ggaagtcttgatggcttcgaaatgtttgggttttcttcaccagcaattgtccaggctgta
gaagcattagatagaaatcgagtttgtacagattattgggactccaggccatattcacgg
ccgcaaggacagattccacagcattctcaatccaaagccaatgcaagacattcccaggga
acatctgaggaccaaaataacagaaaagttcctgggagccaattcttacctgttgaagtt
gatacgacactcgggggtttattcaagaaggcaagcccagaagaattgatcttgctgagt
cgtgttttaagtgacaataaaccaacagctaatcctggtctcataacacagcttcttaat
gaagagattcacaatcgtcctagatga

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