Populus nigra (Lombardy poplar): 133668317
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Entry
133668317 CDS
T10372
Name
(RefSeq) protein argonaute 4-like
KO
K11593
eukaryotic translation initiation factor 2C
Organism
pnz Populus nigra (Lombardy poplar)
Brite
KEGG Orthology (KO) [BR:
pnz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pnz03019
]
133668317
03036 Chromosome and associated proteins [BR:
pnz03036
]
133668317
Messenger RNA biogenesis [BR:
pnz03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
133668317
Chromosome and associated proteins [BR:
pnz03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
133668317
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
133668317
microRNA pathway
RISC loading complex
133668317
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
PAZ
ArgoN
ArgoL1
ArgoL2
ArgoMid
Motif
Other DBs
NCBI-GeneID:
133668317
NCBI-ProteinID:
XP_061944084
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Position
1:complement(27075414..27084375)
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AA seq
911 aa
AA seq
DB search
MESADEQNGNGSQEALPPPPPDVPPNVVPVKAEPEPVKKKPLRVPIARRGLGSKGQKMPL
LTNHFKVNVTNTEGYFFHYCVSLAYEDGRPVDGKGVGRKVIDRVHETYDTEFGKDFAYDG
EKSLFTVGPLPRNKLEFTVVLEDVVSNRNNGNASPDGHGSPNEGDRKRLRRPYHSKTFKV
EISFAAKIPMQAIANALRGQESENSQEAFRVLDIILRQHAAKQGCLLVRQSFFHNDPKNF
VDLGGGVLGCRGFHSSFRTSQGGLSLNIDVSTTMIIQPGPVVDFLIANQNVRDPFSLDWA
KAKRMLKNLRVKASPSNQEYKITGLSEKTCKEQMFQLKQKNGGDGGIEAVEITVYDYFVN
HRKIDLRYSGDLPCINVGKPKRPTYIPLELCSLVSLQRYTKALSTLQRSSLVEKSRQKPQ
ERMTVLSSALKSSKYDAEPMLRSCGISINPSFTQVEGRVLPAPKLKVGNGEDFFPRNGRW
NFNNKKLVEPSRIEKWAVVNFSARCDIRNLVQNLTKCAEMKGIPIEDPFDVFEENPQSRR
APPVVRVEKMFEQIQSRLPGQPKFLLCLLPERKNSDIYGPWKRKNLAEYGIVTQCIAPQR
VNDQYITNVLLKINAKLGGLNSMLAVEHAPSLPLVSKVPTLILGMDVSHGSPGQSDVPSI
AAVVSSRQWPLISRYRACVRTQSPKLEMIDSLFKRVSETEDEGIIRELLLDFYVTSGKRK
PDQIIIFRDGVSESQFNQVLNIELDQIIEACKFLDEKWSPTFVVIVAQKNHHTKFFQPGS
PDNVPPGTIIDNKVCHPRNNDFYLCAHAGMIGTTRPTHYHVLLDEVGFSADDLQELVHSL
SYVYQRSTTAISVVAPICYAHLAATQMGQFMKFEDTSETSSSHGGVTSAGAVPVPQLPRL
QEKVCNSMFFC
NT seq
2736 nt
NT seq
+upstream
nt +downstream
nt
atggagtcagctgatgaacaaaatggaaatgggtcacaggaagccctcccacctccccct
cctgatgttccaccaaatgttgttccagttaaagctgaacctgagccagtcaagaaaaaa
cctctgcgggttccaatagccaggcgtggccttggatccaaaggccaaaagatgcctcta
ttgaccaatcactttaaagtcaatgttactaatactgagggatacttctttcactactgt
gtttcccttgcttatgaagatggccgccctgttgatggtaagggtgttggaagaaaggtg
attgatagggtgcatgaaacttatgataccgagtttggaaaggattttgcttatgacggt
gaaaagagcttgttcactgttggtccccttcctcgcaacaagcttgagttcacggttgtg
cttgaggatgtagtatctaacagaaataatggaaatgcaagccctgatggtcatggaagt
ccaaatgagggtgacagaaagaggttgcgccgtccctatcactccaagacattcaaagtg
gagatcagttttgctgcaaaaatccccatgcaagccattgcaaatgccttgcgtggtcag
gaatcagagaattcccaagaagcctttagagttctggatattatattgcgacagcatgcc
gccaagcagggctgcctccttgtgcgccaatccttcttccataatgatccaaaaaatttt
gtggatttgggaggcggtgttcttggctgcagaggtttccactcaagttttaggacatct
cagggaggcttgtctcttaatattgatgtgtctacgaccatgataatacagccaggtcct
gtggtagattttctaattgccaaccaaaatgtgagagatccattttcacttgactgggcg
aaggcgaaacggatgctcaaaaatctgagggttaaggcaagtccttccaatcaagagtac
aagataactgggttgagtgagaagacttgtaaagaacaaatgtttcagttgaaacaaaaa
aatggaggggatggtgggatcgaggctgttgaaataactgtttatgattattttgtcaat
caccgcaaaatcgatttacgatattctggtgatctgccatgcattaatgttgggaagcca
aagcgccctacttatattcctcttgagctttgttccctggtgtccctacaacgctatacc
aaagcactgtccacacttcaaaggtcttcactggtggagaaatcacggcagaagccgcaa
gaaaggatgactgttttgtctagtgctctgaagagcagcaagtatgatgctgaacctatg
ctacgctcgtgtggcatttcaatcaaccctagtttcacacaagtggaaggccgtgttctg
cctgctccaaagctgaaagttggcaatggggaagatttcttcccaagaaatggacgttgg
aatttcaataacaagaaacttgtggagccatctaggatcgagaagtgggctgtcgtgaac
ttctcagctcgctgtgatatacgcaaccttgtacaaaatctcacaaaatgtgcagagatg
aaaggaattcccatagaagatccttttgatgtatttgaggagaatccacaatcaagacgt
gccccaccagtggttagagtggagaaaatgtttgagcaaattcagtctagacttcctggg
caaccaaagttcttactgtgcttgcttcctgagagaaagaattctgatatatatggccca
tggaagcgcaaaaatcttgctgaatatggaattgtcactcagtgcattgcgcctcaaaga
gttaacgaccaatatattaccaatgttctcctgaagatcaatgcaaagcttggtgggttg
aactctatgttggctgtggaacacgccccctcattacctcttgtgtcgaaggttcccacg
cttatccttgggatggacgtgtcccatggctctcctgggcagtctgatgtcccttcaatt
gctgcggtagtcagctccaggcagtggcctttgatttctcgttatcgggcatgtgtgcga
acacaatccccaaagcttgagatgattgattcattatttaagcgagtgtctgagactgag
gatgaaggaataattagggagcttctgttagacttttatgtgacttcaggaaaaaggaaa
cccgatcagatcatcatatttagagacggggtcagtgaatcacaattcaatcaggtcttg
aatatcgaattggatcagataattgaggcgtgcaagtttcttgatgagaagtggtcccca
acgtttgtggtaattgtagctcagaaaaaccaccacactaaatttttccaacctggatct
cctgataatgtaccacctggtacgatcattgacaacaaagtctgccatccaagaaacaat
gacttctatctctgtgctcatgctgggatgattgggactacaaggcctactcactaccat
gttttgttagacgaggttggtttttcagcagatgatctgcaggaacttgtgcattccctc
tcatatgtataccaaagaagcacgactgccatctctgtagttgcaccaatctgctatgcc
cacctggcagctactcaaatgggccagtttatgaagtttgaagatacttccgagacttcc
tcaagccatggtggggtgacctctgcaggagctgttcctgtcccacagttgccgaggttg
caggagaaagtttgcaattccatgttcttttgttga
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