| Entry |
|
|---|
| Name |
|
|---|
| KO |
| K05749 | cytoplasmic FMR1 interacting protein |
|
|---|
| Organism |
pnz Populus nigra (Lombardy poplar)
|
|---|
| Brite |
KEGG Orthology (KO) [BR:pnz00001]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:pnz03019]
133668364
Messenger RNA biogenesis [BR:pnz03019]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
133668364
Factors involved in mRNA localization
Other mRNA localization factors
133668364
|
|---|
| SSDB |
|
|---|
| Motif |
|
|---|
| Other DBs |
|
|---|
| LinkDB |
|
|---|
| Position |
11:complement(12586295..12609935)
|
|---|
| AA seq |
1284 aa
MAVPVEEAISALSTFSLEDEQAEVQGAGVLVSSERGATNSPIEYGDVSAYRLSLSEDTKA
LNQLNALIQEGKEMASVLYTYRSCVKALPQLPESMKHSQADLYLETYQVLDLEMSRLREI
QRWQASAASKLAADMQRFSRPERHINGPTITHLWSMLKLLDVLVQLDHLKNAKASIPNDF
SWYKRTFTQVSVQWQDIDSMREELDDLQIFLSTRWAILLNLHVEMFRVNNVEDILQVLIV
FAVESLELDFALLFPERHILLRVLPVLVVLATSSEKDSESLYKRVKINRLINIFKNDPVI
PAFPDLHLSPAAILKELSIYFQRFSAQTRLLTLPAPHELPPRDAQDYQRHYLIINHIGTI
RAEHDDFTIRFASSLNQLLLLKSIDGADVDWCKEVKGNMYDMVVEGFQLLSRWTARIWEQ
CAWKFSRPCKEAIPSESNGSSESFFDYEKVVRYNYSAEERKALVELVSYIKSVGSLMHRR
DTLVVDALWETIHAEVQDFVQNTLATMLRTTFRKKKDLSRILSDMRTLSADWMANTSKPE
SDLQSHGGDESKGSFFYPRPVAPTATQVHCLQFLIYEVVSGGNHRKPGGLFGNSGSEIPV
NDLKQLESFFYKLSFFLHILDYSATVATLTDLGFLWFREFYLESSRVIQFPIECSLPWML
VDHVLESQNAGLLESVLMPFDIYNDSAQQALAALRQRFLYDEIEAEVDHCFDLFVSKLSE
IIFTCYKSWAASEMLDPSFLFALDNGEKYSVQPMRFTALFKMTRVKLLGRTIDLRSLVSE
RMNKVFRDNIEFLFDRFESQDLCAVVELEKLLEILKHAHGLLSKDISIDSFSLMLNEMQE
NLSLVSFSSRLATQIWSEMQSDFLPNFVLCNTTQRFVRSSRVPLVPVQKPSVPHAKDNFY
CGTQELNSAHQSFARLHSGFFGIPHMFSVVRLLGSRSLPWLIRALLDHITNKVTTLEPMI
TGLQAALPKSIGLLPFDGGVTGCMRVVKENLNWGTKSELKAKVLRGIKEIGSVLYWMGLL
DIVLREVDTMHFMQTAPWLGLFPGADGQILHSQDGGDSPVVNLFKSATAAIVSNPGCPNP
TSFYTMSKQAEAADLLYKASMNTGSVLEYALAFTSAALDKYCSKWSAAPKTGFIDITTSK
DFYRIYSGLQIGHLEDSVQVSSNNFEVLGDSVAWGGCTIIYLLGQQMHFELFDFSYQVLN
IAEVEAGLLSQAHKNPHAAQGWETLLEAMKKARRLNNHVFSMLKARCPLEDKIACAIKQS
GAPLHRIKFENTVSAFETLPQKGA |
|---|
| NT seq |
3855 nt +upstreamnt +downstreamnt
atggcagttccggtcgaagaagccatatcagctctctctaccttctctcttgaagatgag
caagcagaggtccagggagctggggttttggtttcatccgaaagaggagcaaccaacagt
cctattgagtatggtgatgtttctgcgtatcggttatctctatcggaagacacaaaagct
ctgaatcagctgaatgcacttatccaagaggggaaggagatggcatcggtgctttatacg
tatagaagttgcgtcaaagcacttcctcagcttccagaatccatgaagcacagtcaggct
gacttgtatctggagacgtatcaagttttggacttggagatgagtcgtttgcgtgaaatc
cagagatggcaagcatcggctgcatcgaaactagcagctgatatgcagcggttttctagg
cctgagcggcacattaatggccccacgataacccatctctggtccatgttgaagttgctt
gatgttttagttcaacttgatcatcttaaaaatgccaaggcaagcatacctaatgacttc
tcatggtacaagaggacattcacccaagttagtgttcagtggcaagacattgactctatg
agggaggagttagatgatttacagatattcttaagcacaagatgggcaatcttattgaac
ttgcatgtcgagatgtttcgggtgaacaatgtagaagatattcttcaagttctgatagtc
tttgctgttgagtcattggaattggattttgcgcttttatttcctgagagacacattctt
ctacgtgttttacctgtccttgtcgtcttagcaacatcatcagaaaaagacagtgagtca
ctgtacaagagggtaaaaataaacaggctgataaatattttcaagaacgatccagtcatt
cctgcattccctgatcttcatctttctcctgctgcaatcttgaaagagttgtccatttac
tttcaaaggttttctgcacaaactcgtcttctcacccttccagcgcctcatgagctccca
cctcgggacgcacaagattatcagaggcattatctcatcattaatcacattggaactatt
cgtgccgagcatgatgatttcacaattcgttttgcttcatccttgaatcagctattatta
ttgaagtcaatagatggtgcagatgttgattggtgcaaagaagtcaagggaaacatgtat
gatatggttgttgaagggttccagctcttaagcagatggactgcacggatttgggaacaa
tgtgcttggaaattttctcgcccatgcaaagaggcaattccttcagaatcaaatggatct
tcagaatcgttttttgactatgaaaaggtggtacgctataattacagtgctgaggagagg
aaagcacttgttgagcttgttagttacataaaaagtgttggatcgctgatgcatcggcgt
gacacattggtagttgatgccttatgggaaacaatacatgctgaagtccaagattttgtc
caaaacacattagccaccatgttgaggactacctttagaaagaagaaggacctgtcgagg
attctttctgacatgcggacgctttcagcagactggatggcaaatacaagcaagcctgaa
tctgatttacagtcacatggaggtgatgaaagcaaagggagcttcttttatccaaggcca
gtggcacccacagccacgcaggtccattgcttgcagttcttgatatatgaagtggtgtct
ggtggtaatcatcggaagcctggtgggctctttggcaacagtgggtctgagattcctgtg
aacgatttaaagcaattggagagcttcttttacaagcttagcttcttcctacatatattg
gactattcagcgactgtggcaactttgacagatcttggtttcttatggtttagagaattt
tatttggagtcatctcgagttattcagtttcctattgaatgctctcttccttggatgctg
gtggatcatgtgcttgagtcccagaatgcaggtcttcttgaaagtgttctgatgccattt
gacatctacaatgattcagctcagcaagctctggctgcattaaggcagcgattcctctat
gatgaaattgaggccgaggtggaccattgttttgatttatttgtttcaaaactctctgaa
attattttcacttgttacaagagttgggcagcaagtgaaatgcttgatccttcattcctc
tttgctttggacaatggagaaaagtattctgtacagcctatgagattcaccgcactattt
aagatgacgagagtaaagttacttgggaggaccattgatttaagaagcttggtttctgaa
agaatgaacaaggttttcagagacaatattgagtttctttttgatcgttttgagtctcaa
gatctatgtgcagtggtggaattagaaaaacttctggaaatattaaagcatgctcatgga
ctgctttcaaaagatatttcaatagactcgttcagtctcatgttgaatgaaatgcaagaa
aacttatctcttgtatcattttctagtcgacttgcaactcagatttggtcagagatgcaa
agtgatttcctgccaaactttgtcttatgcaacactactcagcgttttgtccggtcatca
agagttcctcttgttcctgtgcaaaagccatcagttccccatgcaaaggacaacttctat
tgtggtactcaggagttgaattctgcgcatcaaagctttgctcgtttgcacagtgggttc
tttggaattccccacatgttttctgttgttagacttctaggatccagatcgttgccttgg
cttatccgagccctgttagatcatataacaaataaggtaactacacttgaaccaatgatt
actggattgcaagcagcgttgccaaaatctattggactgctcccttttgatggaggagtc
acaggctgtatgagggttgtcaaagaaaatcttaactggggaactaaatcagagctcaaa
gcaaaggttcttcgagggattaaagagattggcagtgtgttatattggatggggcttctt
gacattgtattgagggaagttgataccatgcatttcatgcaaactgccccttggttgggc
ttgtttcctggcgcagatggccaaatattgcattcacaggatggtggggatagtcctgtt
gtcaatcttttcaaatcagccactgctgcaatagtgtctaaccctggttgtccaaatcca
acatctttttataccatgtcaaaacaggcagaagctgcagatcttctttacaaagctagc
atgaatactggaagtgtgctggaatatgcccttgcttttaccagtgctgcattggataaa
tattgcagtaaatggagtgctgctcccaagacagggttcattgacataacaacctcaaag
gacttttaccgtatatatagtggccttcaaattggacacctggaggattctgttcaagta
tcatcgaataattttgaagtcttgggtgactcagttgcatggggtggttgtaccataatc
tacttgcttggacagcagatgcattttgaactctttgatttttcatatcaagtcctcaat
attgcagaagtggaggcaggattgcttagccaagcacataagaatcctcatgctgcccag
ggatgggaaaccctattagaagccatgaagaaagcaagaaggttgaacaatcatgttttc
tcgatgctgaaagcccggtgcccccttgaagacaagatagcgtgtgctatcaagcaaagt
ggtgcccctctgcatcggattaagttcgagaacactgtttcagcatttgaaacattgcct
caaaaaggtgcctga |
|---|
