Populus nigra (Lombardy poplar): 133668394
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Entry
133668394 CDS
T10372
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 15-like isoform X1
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
pnz Populus nigra (Lombardy poplar)
Brite
KEGG Orthology (KO) [BR:
pnz00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pnz01002
]
133668394
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pnz04121
]
133668394
Enzymes [BR:
pnz01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
133668394
Peptidases and inhibitors [BR:
pnz01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
133668394
Ubiquitin system [BR:
pnz04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
133668394
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
zf-MYND
Motif
Other DBs
NCBI-GeneID:
133668394
NCBI-ProteinID:
XP_061944195
LinkDB
All DBs
Position
1:complement(10266279..10274353)
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AA seq
937 aa
AA seq
DB search
MLEPREADIPVLFLVLVVLPLVAYILLGKWTESAKKRERISLLAQLAAEEACRAEVMATT
HVIPPMSTSKNGIQVCARCFSPATTRCSRCKSVRYCSGKCQIIHWRQAHKEECQLLETTS
SCSSPMATSCDESIPERLSINDGMDLFSLRYNSKQPTMDIGPSVNNVHLISSTGASAAVN
CPAIDTSQEAMMLHRRSTNKQVSCKSNKEMLRRQEVAVFDSSQETAGIRPTNLTSSSSIP
NVFVNGQDITSAMDETHKYSIQHQNLSKSRSNCASSSSLNAGKYGTNADFSNAEASFNGE
MAGPKYSYESLVTNENVKANSGLHPMGNRSSKSSKSKIKVSGDQSYTEIDGKGQLTDDSK
VARMSNANPAPGSNGVTSIDIMKMMGLRKSTKLARQDIAEINVIHKTTRMLFPYEEFVKI
FNCEAINLTPRGLVNCGNSCYANAVLQCLTCTKPLIIFLLRRSHSRACCGKDWCLMCELE
QHVMMLRECGGPLSPSRILLHMRKINCQIGDGSQEDAHEFLRLLIASMQSICLERLGGED
KVDPRLQETTFIQHTFGGLLRSKVKCLRCHHESERYENIMDLTLEIFGWVESLEDALTQF
TTPEELDGENMYRCGRCAAYVRARKQLSIHEAPNILTIVLKRFQEGKYGKINKCITFPDM
LDMIPFMTGMGDVPPLYMLYAVVVHLDTLNASFSGHYVAYVKDLRGSWFKIDDTEVHPVS
MSQVMLEGAYILFYKRSCTRPQKLICEKPIGQQVPVSSRHCTSRTQKPSRQGQRRCSSHC
VGPEVSLDLKPENGSGLANYANGIPRRSSSKNITQVMDFSDATSSDWSIFTSSDEASFTT
ESTRDSFSTVDYADACNVDTFSSIFNDLYAPESSYRNTICRRTFSYSRPQTRFILETGHV
LDSYSSTQPPGHGKERILHRSVIHQSNSSRTVPAPCL
NT seq
2814 nt
NT seq
+upstream
nt +downstream
nt
atgcttgaaccaagggaagctgatatacctgtcctgtttcttgtcttggttgtgcttcct
ctggttgcttacattttgcttgggaaatggactgagtctgcaaagaagagagagaggata
agtttgcttgctcaactggctgccgaagaagcttgtagagcagaagtgatggctaccacc
catgtcattcctcccatgtctacttcaaagaatggaattcaagtttgtgccagatgcttt
agtccagctacaacccgctgctccagatgcaagtctgttagatattgttctgggaagtgt
cagataattcattggaggcaagcccataaggaagagtgccaactgttggaaaccaccagt
tcatgctcatctcctatggctacctcatgtgatgaatccatccccgagaggttatcaatc
aatgatggcatggacttattttccttaaggtataatagcaagcagcctacaatggatatt
ggtccttcagtcaataatgtccatctcatatcaagcactggtgcttctgctgctgttaat
tgtcctgcaattgatacctctcaagaggctatgatgctacacagaaggagcacaaacaag
caagtttcatgcaaatcaaacaaagaaatgttaagaagacaggaagtggctgtattcgat
tcttcccaagaaactgctggaatcagacccaccaatttaacttcttctagtagtatccct
aatgtttttgttaatgggcaagacattactagtgctatggatgagactcacaagtattca
atacaacatcagaatttgtccaaatcaagaagcaactgcgcctcctcaagctcattgaat
gctggaaaatatggaacaaatgcagatttctctaatgcagaagcttcttttaatggtgaa
atggcaggacctaaatattcttatgaatcactagttacgaatgaaaatgtgaaggctaat
agtggattgcatcccatgggaaacagatcttctaaatcatcaaaatcaaagataaaagtc
tctggagatcaatcatatactgaaatagatggaaaagggcaacttacagatgattcaaaa
gttgcaagaatgagcaatgccaaccctgcaccaggaagcaatggggttacaagcatcgat
attatgaagatgatgggtttaaggaagtcaacaaaacttgccagacaagatatagcagaa
attaatgttattcacaaaacaacaaggatgctgttcccttatgaagaatttgtgaagatc
ttcaattgcgaagctattaacttaacacccagaggacttgtaaattgtggaaacagttgc
tatgccaatgctgtccttcaatgtttaacctgcactaaacctctgatcatcttcttgctt
cgtagatcacattcaagagcatgttgtgggaaggattggtgtctcatgtgtgaacttgag
caacatgtaatgatgttaagagaatgtgggggccctctatctcctagtagaatccttctt
catatgcgtaaaattaattgccagattggtgatggaagtcaggaagatgcacacgagttc
ttaaggcttctgattgcatcaatgcaatccatttgcttggagagactgggtggtgaagac
aaggttgatcctagattgcaagaaacaacttttatacagcatacttttggtgggcttctt
aggtcaaaggtcaaatgtctgaggtgtcatcatgagtcagagcgatatgagaatattatg
gaccttactcttgagatatttggttgggttgagtcacttgaagatgcgttgactcagttt
acaacccctgaagaattggatggagaaaacatgtacagatgtggaaggtgtgctgcatat
gtccgagccaggaagcagttgagcatacatgaggcaccaaacatcctgacaattgttttg
aagagattccaggagggaaaatatgggaaaataaacaaatgtatcacgtttcctgacatg
ctggatatgatcccatttatgactggaatgggtgatgtccctcctctttacatgctttat
gctgttgtggtacatttggataccctgaatgcatctttttctggacattacgttgcatat
gtaaaagatttgcgaggcagctggttcaagatagatgacactgaggttcatccagtatca
atgagccaggtgatgttggaaggagcatacatcttattttacaagaggtcctgtactcgc
cctcaaaagctaatttgtgagaaacctatcgggcaacaagttcctgtatcttcaagacac
tgcacatcaagaactcagaaaccttcaagacaaggacagagaagatgcagcagccactgt
gttggcccagaggtttcattggatctcaaaccagaaaatggttctggccttgccaactat
gctaatggcattccaaggaggagttcaagcaaaaatatcacacaggtgatggatttctct
gatgctacctcaagtgattggtccatttttacaagctcagacgaggcatctttcacaacc
gagagcaccagagactctttcagtactgtagattatgctgatgcatgcaatgtagataca
ttctcctcaattttcaatgatctgtatgctccagaatcatcttaccggaatactatttgc
cgtagaacattttcatatagtaggccgcaaactaggttcatcttggagacgggccatgtt
ttggattcatactcatcaacccaacctccagggcatggaaaggagagaattctacacagg
tctgtgattcatcaatccaattcctcacggacagttcctgcaccatgtctgtag
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