Populus nigra (Lombardy poplar): 133668408
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Entry
133668408 CDS
T10372
Name
(RefSeq) protein EXPORTIN 1A-like isoform X1
KO
K14290
exportin-1
Organism
pnz Populus nigra (Lombardy poplar)
Pathway
pnz03008
Ribosome biogenesis in eukaryotes
pnz03013
Nucleocytoplasmic transport
pnz03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
pnz00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
133668408
03008 Ribosome biogenesis in eukaryotes
133668408
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
133668408
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pnz03019
]
133668408
03009 Ribosome biogenesis [BR:
pnz03009
]
133668408
03016 Transfer RNA biogenesis [BR:
pnz03016
]
133668408
03036 Chromosome and associated proteins [BR:
pnz03036
]
133668408
Messenger RNA biogenesis [BR:
pnz03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
133668408
Ribosome biogenesis [BR:
pnz03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
133668408
Pre-60S particles
133668408
Transfer RNA biogenesis [BR:
pnz03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
133668408
Chromosome and associated proteins [BR:
pnz03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
133668408
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CRM1_C
Xpo1
CRM1_repeat_2
CRM1_repeat_3
CRM1_repeat
IBN_N
Adaptin_N
Pro_dh
mTOR_dom
Motif
Other DBs
NCBI-GeneID:
133668408
NCBI-ProteinID:
XP_061944208
LinkDB
All DBs
Position
11:complement(7197528..7213538)
Genome browser
AA seq
1089 aa
AA seq
DB search
MTSLVMAAEKFRDLSQAIDVPLLDATVAAFYGTGSKEERAAADRILQDLQSNPDMWLQVV
HILQNTKNLNTKFFALQVLEGVIKYRWNALPVEQRDGMKNYISEVIVQLSSNEASFRMER
LYVNKLNVTLVQILKHEWPARWRSFIPDLVAAAKTSETICENCMVILKLLSEEVFDFSRG
EMTQQKIKELKQSLNSEFQLIHELCLYVLSASQRTELIQATLSTLHAFLSWIPLGYIFES
PLLETLLKFFPMPSYRNLTLQCLTEVAALNFGDFYNMQYIKMYNFFMVQLQAILPSTTKI
PEAYANGSSEEQAFIQNLALFFTSFYKSHIRVLESSQENISALLMGLEYLINISFVDDTE
VFKVCLDYWNSLVLELFEPHHNLDTPAATVNMMGLQTLNSRNLQMPLLHGMVDGLGSQIL
QRRQLYAAPMSKLRMLMICRMAKPEEVLIVEDENGNIVRETLKDNDVLVQYKIMRETLIY
LSHLDHEDTEKQMLKKLSKQLSGEDWNWNNLNTLCWAIGSISGSMMEEQENRFLVMVIRD
LLNLCEITKGKDNKAVIASNIMYVVGQYPRFLRAHWKFLKTVVNKLFEFMHETHPGVQDM
ACDTFLKIVQKCKRKFVIVQVGESEPFVSELLSGLPTTVADLEPHQIHTFYESVGHMIQA
ESDLQKRDEYMQRLMDLPNQKWAEIIGQAHQSVDFLKDQEVIRTVLNILQTNTSVANSLG
TYFLSQISLIFLDMLNVYRMYSELISSSIAEGGPYASKTSYVKLLRSVKRETLKLIETFL
DKAEDQPQIGKQFVPPMMDPVLGDYARNLPDARESEVLSLFATIINKYKAAMIEDVPRIF
EAVFQCTLEMITKNFEDYPEHRLKFFSLLRAIAAHCFPALIRLSSEQLKLVMDSIIWAFR
HTERNIAETGLNLLLEMLKNFQASEFCNQFYRSYFLTIEQEIFAVLTDTFHKPGFKLHVL
VLQHLFCSAESGALSEPLWDTTTVPYPYLNNAMFVREYTIKLLGTSFPNMTASEVTQFVN
GLFESKTNLSIFKNHIRDFLVQSKEFSAQDNKDLYAEEAAVQRERERQRMLSIPGLIAPN
EIQDEMLDS
NT seq
3270 nt
NT seq
+upstream
nt +downstream
nt
atgacttctttggttatggcggcagagaaatttagggatttaagtcaggcgattgatgtt
cctttacttgatgctactgttgctgccttctatggcactggatctaaagaagagagggca
gctgccgatcgcattttgcaggacttgcaaagcaatccagatatgtggcttcaagtggtg
cacattctacaaaatacaaagaacctaaacaccaagttctttgccttgcaggtcctagag
ggtgttataaaatatagatggaatgcattgcctgttgaacaacgagatggaatgaaaaat
tatatttcagaagtcattgtacagctttcaagtaacgaggcgtcttttcgaatggaaagg
ctgtatgtaaacaagctcaatgttactttggtccagattctcaagcatgagtggccagct
aggtggcgaagctttattcctgatcttgttgcagcggcaaaaactagtgaaactatatgt
gagaattgcatggttatattgaaacttctaagtgaagaagtttttgatttctcacgagga
gagatgactcaacagaagatcaaagagcttaaacaatcattaaacagtgagtttcaactc
atccatgagttatgcttatatgtcctatcagcctcccaaagaaccgagcttattcaagca
acattgtccaccttgcatgcttttctttcttggattcccctgggctatatttttgaatct
cccctgcttgaaacacttctgaaattttttcccatgccatcttatcggaaccttaccctt
cagtgtttgacagaggtcgcggctcttaattttggggatttctataacatgcagtacatt
aagatgtataattttttcatggtccagttacaggccattcttccatcaaccaccaagatc
ccagaggcttatgcaaatggatctagtgaagaacaagcattcattcagaatcttgcactg
tttttcacttcgttttacaagtctcatattcgggtgctggagtcttctcaggagaatata
tctgctctgctaatgggtcttgagtatctaattaatatctcatttgttgatgacactgag
gtttttaaggtttgcctggactattggaactctttggttttggagctttttgagccacac
cataatttggacactcctgcagccactgtaaacatgatgggattgcagactctgaattct
cggaatctgcagatgcctttgctacacggcatggttgatggtttagggtcacaaattttg
cagaggaggcagctttatgctgctccaatgtccaaattgagaatgcttatgatctgtcgt
atggctaaacccgaggaggttctgatagttgaagatgaaaatggtaatattgttcgtgaa
accttgaaggacaatgatgttcttgttcaatataagattatgagagaaacattaatctat
ttgtcacatcttgatcacgaggatactgaaaagcagatgttgaagaaattaagtaaacaa
ctgagtggtgaagattggaactggaacaacttaaacactttatgctgggcaattggatcc
atttctggttccatgatggaggaacaggaaaaccgatttcttgtgatggtcattcgtgat
ttgctgaatttatgtgaaatcacgaaagggaaggataacaaagctgttattgcgagtaac
atcatgtatgtcgttggccagtacccaagatttctcagagctcactggaagttcctgaaa
actgttgtcaataaattgttcgaatttatgcatgaaactcatcctggagttcaggacatg
gcctgtgacacattcttgaaaattgtccagaaatgcaagcggaaatttgttattgtgcag
gttggagaaagtgagccatttgtatctgaacttctatctggccttccaacaactgttgct
gatctcgagccacatcagatacatacattttatgaatctgttggccatatgattcaagca
gaatctgatctacagaagagagatgaatacatgcagaggttgatggatctccctaaccag
aaatgggctgaaattataggacaggcacatcaaagtgtagattttctgaaagatcaagaa
gtgatcagaactgtgcttaatatattgcagaccaatacaagtgttgcaaattctcttggg
acatactttttatctcaaatttctcttatatttttggacatgcttaatgtgtacagaatg
tacagtgagcttatatcaagcagtattgcagaaggagggccttatgcatctaaaacatcc
tatgtgaaacttttgcggtctgttaagagggagacacttaagctcatcgagacatttttg
gacaaggccgaagatcaaccacaaattgggaagcagttcgtgcccccaatgatggatcct
gttcttggtgattatgctaggaatttgccagatgctagggaatcagaagttttgtcactt
tttgcaacaattataaacaagtacaaagctgcaatgatagaagatgtacctcgaatattt
gaagctgttttccagtgtacattggagatgataaccaaaaatttcgaggattatccagaa
catcgccttaagttcttttcattacttcgtgccatcgctgcacattgtttccctgccttg
attcgtttgtctagtgagcaactgaagcttgtgatggattcaattatatgggcattccgt
catacagagaggaatatagctgagactggtctaaacctattgttggagatgctgaagaac
tttcaggcgtctgagttctgtaatcagttctacaggtcatactttttgacaattgagcag
gaaatatttgctgtactgacagatacatttcacaaacctggttttaagttgcatgttttg
gtgctacaacacttattttgctcggcggagagtggtgctttgtcagagcctctgtgggat
actacaacagtcccttatccatatttgaataatgctatgtttgttcgtgagtacaccatt
aaacttctgggcacatcattccctaacatgactgcatctgaggtcactcaatttgttaac
ggactatttgagtcaaaaaccaacctgtccatattcaagaatcacattcgagactttctc
gtgcaatcaaaggaattttctgctcaggataataaagatctctatgcagaagaggctgct
gttcagagggaaagggagcgacaaagaatgctttccattccagggcttattgcccctaat
gaaatacaagatgagatgttagattcttag
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integrated database retrieval system