Populus nigra (Lombardy poplar): 133668424
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Entry
133668424 CDS
T10372
Name
(RefSeq) uncharacterized protein LOC133668424 isoform X1
KO
K03267
peptide chain release factor subunit 3
Organism
pnz Populus nigra (Lombardy poplar)
Pathway
pnz03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pnz00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
133668424
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pnz03019
]
133668424
03012 Translation factors [BR:
pnz03012
]
133668424
Messenger RNA biogenesis [BR:
pnz03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
133668424
Translation factors [BR:
pnz03012
]
Eukaryotic type
Release factors
133668424
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
EF-G_D2
G-alpha
Motif
Other DBs
NCBI-GeneID:
133668424
NCBI-ProteinID:
XP_061944248
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Position
11:5761010..5775718
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AA seq
523 aa
AA seq
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MAEAPLLDIEEEVRSLQLDSADCASEINGEINEDARPEEVEKVDEMEKDSDHKVTVSSQE
VQAELPKVKDKEVPAPEDVEAVVEMEQYNKKRHLNVVFIGHVDAGKSTTGGQILFLSGQV
DDRTIQKYEKEAKDKSRESWYMAYIMDTNEEERVKGKTVEVGRAHFETETTRFTILDAPG
HKSYVPNMISGASQADIGVLVISARKGEFETGYERGGQTREHVQLAKTLGVSKLLVVVNK
MDEPTVNWSKERYDEIESKMIPFLKSSGYNVKKDVQFLPISGLMGTNMKTRLDKAVCPWW
NGPCLFEALDSIEVPPRDPNGPLRMPIIDKFKDMGTVVMGKVESGSVMEGDTLLVMPNKT
QVKVLAVFCDENKVRRAGPGENVRVRLSGIDDEDILSGFVLSSVARPIFSVTEFDAQLQI
LELLDNAIFTAGYKAVLHIHSVVEECEIVQLLQQIDPKTRKPMKKKVLFVKNGAIVLCRI
QVNNLICVEKFSDFPQLGRFTLRTEGKTVAVGKVTELPSGSNF
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atggcagaagcgcctctacttgatattgaggaggaggttcgctcattgcagcttgactca
gcggattgtgcatcagagataaatggggagataaatgaagatgcaaggccagaagaagtt
gagaaggtggatgagatggagaaagattcagatcataaagtcactgtgagctctcaggaa
gtgcaggctgagttgcccaaagtgaaagataaagaagtacctgcaccagaagatgtggaa
gcagtggttgagatggaacagtacaataagaagcgacacttaaatgttgtttttattggc
catgttgatgctggcaagtccaccactgggggccagatactctttcttagtggccaggtg
gatgatcgcacaatccagaaatatgagaaagaagctaaggacaaaagtagagaaagctgg
tatatggcttatattatggacactaatgaggaagagagggttaagggcaaaactgttgaa
gttggaagagcacactttgaaacagagacaacaagattcacaattttagatgcaccgggt
cacaagagctatgttccaaatatgattagcggagcatctcaggctgatataggcgtgcta
gttatttctgctcggaaaggagaatttgaaactggctatgagagaggtgggcagacccgt
gagcatgttcaacttgcaaagaccttgggtgtttcgaagctgcttgttgttgtaaataaa
atggatgagccaactgtgaactggtcaaaagaaaggtatgatgagattgaatcaaagatg
ataccgtttcttaagtcttctggctacaatgtgaagaaagatgtccaattcctaccaata
tctggtctaatgggcaccaacatgaaaacaagattggataaggctgtatgtccatggtgg
aatggcccatgcctttttgaagctcttgattctattgaagttcctccacgagatccaaat
ggtcctttgaggatgcctattattgacaaattcaaggacatgggaactgttgttatgggc
aaagtagagtctggtagtgtgatggaaggtgataccttgttggtcatgccaaacaagact
caggtgaaagttcttgctgtgttttgcgatgaaaataaggtaagacgtgcaggaccagga
gaaaatgtgagggttagattatctggaattgatgatgaggatatattgtcgggttttgtt
ctttcaagtgttgcaaggccaatcttttcagttacagagtttgatgcccagttgcaaatc
cttgagttactggataacgcaatttttacagctggctataaggctgtcttgcacatacat
tctgttgttgaggagtgtgagattgttcagctgctgcagcaaattgatccaaagactagg
aaacctatgaaaaagaaagtcctctttgtgaagaatggcgcaattgttctctgccgtatt
caggtaaacaatttgatatgcgttgagaaattctcagattttccacaactcggcaggttt
actcttcgtactgaggggaaaacagttgcagtgggaaaagtcacagaacttccgtctggt
tctaatttttga
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